RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 PATL1Q86TB9 770 aaKnown RBP13.3□□□□□ -0.28
BRCA1-223ENST00000494123 SLC22A16Q86VW1 577 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 OR4K17Q8NGC6 315 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 FRMD6Q96NE9 622 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 TTTY12Q9BZ98 90 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 RTN4RQ9BZR6 473 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-223ENST00000494123 SEC14L3Q9UDX4 400 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 PACSIN3Q9UKS6 424 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 IFT52Q9Y366 437 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 BOD1L1Q8NFC6 3051 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 SPTA1P02549 2419 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 EIF4E1BA6NMX2 242 aaKnown RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 TTLL8A6PVC2 850 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 SNPHO15079 494 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 GMNNO75496 209 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 SORBS2O94875 1100 aaKnown RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 CSTAP01040 98 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 CRYABP02511 175 aaKnown RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 UBL4AP11441 157 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 TCN1P20061 433 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 GABPB1Q06547 395 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 FOXO1Q12778 655 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 FGFBP1Q14512 234 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 INPP5JQ15735 1006 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 CD226Q15762 336 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 TIGD3Q6B0B8 471 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 VRK2Q86Y07 508 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 PLCZ1Q86YW0 608 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 ARHGAP24Q8N264 748 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 SLC26A7Q8TE54 656 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 DTNBP1Q96EV8 351 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 SH3YL1Q96HL8 342 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 BBC3Q96PG8 261 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 ARMC7Q9H6L4 198 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 GMPR2Q9P2T1 348 aaKnown RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 ZNF443Q9Y2A4 671 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 SLC35A3Q9Y2D2 325 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 GPC6Q9Y625 555 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-223ENST00000494123 ZFYVE26Q68DK2 2539 aa13.29□□□□□ -0.28
BRCA1-223ENST00000494123 PRORSD1PA6NEY8 169 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 LRRC3CA6NJW4 275 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 C17orf51A8MQB3 221 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 FAM166BA8MTA8 275 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 TFECO14948 347 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 ZNF264O43296 627 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 HCRTR2O43614 444 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 GMFGO60234 142 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 CYP7B1O75881 506 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 THBS1P07996 1170 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 PABPC4LP0CB38 370 aaKnown RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 NID1P14543 1247 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 RPS4Y1P22090 263 aaKnown RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 GDF1P27539 372 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 PPIAP62937 165 aaKnown RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 KCNJ10P78508 379 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 ALDH6A1Q02252 535 aaKnown RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 TOMM20Q15388 145 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 SPATS1Q496A3 300 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 ARMC8Q8IUR7 673 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 CMIPQ8IY22 773 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 CISD2Q8N5K1 135 aaKnown RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 TMCO5AQ8N6Q1 288 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 WDSUB1Q8N9V3 476 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 FIG4Q92562 907 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 GNRHR2Q96P88 292 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 TAAR6Q96RI8 345 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 BTBD10Q9BSF8 475 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 PTGES2Q9H7Z7 377 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 PRPF19Q9UMS4 504 aaKnown RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 CARD8Q9Y2G2 431 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 C15orf41Q9Y2V0 281 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 M0QX08 132 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 CBR3O75828 277 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 UBTFL6P0CB48 400 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 HSD17B1P14061 328 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 ADH7P40394 386 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 CCR4P51679 360 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 PCBP3P57721 371 aaKnown RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 ZNF117Q03924 483 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 LRRC23Q53EV4 343 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 MRPL2Q5T653 305 aaKnown RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 FNDC7Q5VTL7 733 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 ZNF836Q6ZNA1 936 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 FAM156AQ8NDB6 213 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 B4GALNT2Q8NHY0 566 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 SLC7A6OSQ96CW6 309 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-223ENST00000494123 NTNG2Q96CW9 530 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 THTPAQ9BU02 230 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 DSN1Q9H410 356 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 MED11Q9P086 117 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 SLC13A4Q9UKG4 626 aa13.28□□□□□ -0.28
BRCA1-223ENST00000494123 CLDN24A6NM45 220 aa13.27□□□□□ -0.29
BRCA1-223ENST00000494123 CXCR6O00574 342 aa13.27□□□□□ -0.29
BRCA1-223ENST00000494123 ADAM10O14672 748 aa13.27□□□□□ -0.29
BRCA1-223ENST00000494123 EIF4E2O60573 245 aaKnown RBP13.27□□□□□ -0.29
BRCA1-223ENST00000494123 TRAPPC6AO75865 159 aa13.27□□□□□ -0.29
BRCA1-223ENST00000494123 GLSO94925 669 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-223ENST00000494123 NUDT14O95848 222 aa13.27□□□□□ -0.29
BRCA1-223ENST00000494123 IFNA14P01570 189 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms