RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FABP4P15090 132 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 BMI1P35226 326 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 STK19P49842 368 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ARHGAP1Q07960 439 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 XKR4Q5GH76 650 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SLC35D3Q5M8T2 416 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 WDR88Q6ZMY6 472 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 Q6ZTK2 550 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 C16orf59Q7L2K0 433 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 KDELC2Q7Z4H8 507 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 FBXO16Q8IX29 292 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF283Q8N7M2 679 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SPPL3Q8TCT6 385 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 NSUN5Q96P11 429 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SNRNP25Q9BV90 132 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 TMED9Q9BVK6 235 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 DDA1Q9BW61 102 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF350Q9GZX5 532 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 POT1Q9NUX5 634 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 PARPBPQ9NWS1 579 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SMCO3A2RU48 225 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 F5H0A9 414 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 TNFRSF11BO00300 401 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 SIAH2O43255 324 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 SLC19A2O60779 497 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 PCDH8O95206 1070 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 IFNGP01579 166 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 RLN1P04808 185 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 SERPIND1P05546 499 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 GIPP09681 153 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 UCHL1P09936 223 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 LINC00614P0C842 121 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 EPXP11678 715 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 ELK1P19419 428 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 AHCYP23526 432 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 CCND3P30281 292 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 CD200P41217 278 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 MECP2P51608 486 aaKnown RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 SORDQ00796 357 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF630Q2M218 657 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 CERS6Q6ZMG9 384 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF467Q7Z7K2 595 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 GPR135Q8IZ08 494 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 GTPBP8Q8N3Z3 284 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 FAM24BQ8N5W8 94 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 OR10G2Q8NGC3 310 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 OR2A12Q8NGT7 310 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 TERB2Q8NHR7 220 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 NEIL3Q8TAT5 605 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 METTL21AQ8WXB1 218 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 TKTL2Q9H0I9 626 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 MAGIXQ9H6Y5 334 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF302Q9NR11 478 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 SIX4Q9UIU6 781 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 A0A1W2PPQ1 181 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 A0A1W2PRB8 838 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 AGPAT2O15120 278 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 CYB5R3P00387 301 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 THP07101 528 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 RNH1P13489 461 aaKnown RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 MST1P26927 711 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 AQP1P29972 269 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 OR1E1P30953 314 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 PITPNBP48739 271 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 F2RL1P55085 397 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 LSM6P62312 80 aaKnown RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 RPS25P62851 125 aaKnown RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 ENPP2Q13822 863 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 ZBTB6Q15916 424 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 LRRC37A5PQ49AS3 106 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 ARSJQ5FYB0 599 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 TECRLQ5HYJ1 363 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 OR10K2Q6IF99 312 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 PAQR6Q6TCH4 344 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 LANCL3Q6ZV70 420 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 SSX7Q7RTT5 188 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 KHSRPQ92945 711 aaKnown RBP eCLIP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM143Q96AN5 459 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 R3HDM4Q96D70 268 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 P2RY11Q96G91 374 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 KCNJ15Q99712 375 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 NDUFAF3Q9BU61 184 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 C20orf24Q9BUV8 137 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 ACPTQ9BZG2 426 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 POLR3FQ9H1D9 316 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-205ENST00000493587 C20orf85Q9H1P6 137 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF408Q9H9D4 720 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 CREBZFQ9NS37 354 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 MED17Q9NVC6 651 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 FAM96BQ9Y3D0 163 aa6.43□□□□□ -1.38
VPS13B-205ENST00000493587 ZCWPW2A0A1B0GU75 182 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 CPED1A4D0V7 1026 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR6C76A6NM76 312 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 NPIPB9F8W1W9 429 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 H3BN98 237 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 PIAS2O75928 621 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 NXPH2O95156 264 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ESR1P03372 595 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ADCYAP1P18509 176 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms