RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 TMEM99Q8N816 258 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 ZNF740Q8NDX6 193 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 BPIFCQ8NFQ6 507 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 WFDC5Q8TCV5 224 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 KLK6Q92876 244 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 RGMAQ96B86 450 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 NEURL3Q96EH8 262 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 SLC19A3Q9BZV2 496 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 QRSL1Q9H0R6 528 aaKnown RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 DNTTIP1Q9H147 329 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 TAS2R3Q9NYW6 316 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 KLHL42Q9P2K6 505 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 A0A1B0GUH1 482 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 SLC16A5O15375 505 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 PIP5K1CO60331 668 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 PTHLHP12272 177 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 GALP22466 123 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 IMPA1P29218 277 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 RAB13P51153 203 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 UBE2MP61081 183 aaKnown RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 RIPPLY1Q0D2K3 151 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 C18orf63Q68DL7 685 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 GPR142Q7Z601 462 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 ZNF467Q7Z7K2 595 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 MRGPREQ86SM8 312 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 RNF180Q86T96 592 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 SLC9B2Q86UD5 537 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 CDH26Q8IXH8 852 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 LRRC56Q8IYG6 542 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 OR4D10Q8NGI6 311 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 OR5M1Q8NGP8 315 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 C2CD4CQ8TF44 421 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 DOCK6Q96HP0 2047 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 LCORQ96JN0 433 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 C7orf50Q9BRJ6 194 aaKnown RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 YIPF4Q9BSR8 244 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 ADAT1Q9BUB4 502 aaKnown RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 IFT27Q9BW83 186 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 HMX1Q9NP08 348 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 MYNNQ9NPC7 610 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 HINT3Q9NQE9 182 aaKnown RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 PCDHGA5Q9Y5G8 931 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 IRAK3Q9Y616 596 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 GOLGA4Q13439 2230 aaKnown RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 OR6C74A6NCV1 312 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 OR2W5A6NFC9 320 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 ZNF197O14709 1029 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 TBL1XO60907 577 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 STC2O76061 302 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 HIST1H2ABP04908 130 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 PTGER1P34995 402 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 AP1S1P61966 158 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 C2orf68Q2NKX9 166 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 CDC73Q6P1J9 531 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 GLDNQ6ZMI3 551 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 ZNF600Q6ZNG1 722 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 HIST3H2AQ7L7L0 130 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 CBARPQ8N350 705 aaPredicted RBP10.92□□□□□ -0.66
HDAC4-210ENST00000493582 SPICQ8N5J4 248 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 ACBD7Q8N6N7 88 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 OR10K1Q8NGX5 313 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 SMIM4Q8WVI0 70 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 HIST1H2ACQ93077 130 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 WNT2BQ93097 391 aa10.92□□□□□ -0.66
HDAC4-210ENST00000493582 A0A0U1RQF3 1178 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 GPR31O00270 319 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 RTCAO00442 366 aaKnown RBP10.91□□□□□ -0.66
HDAC4-210ENST00000493582 PRAF2O60831 178 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 REM1O75628 298 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 OR2A4O95047 310 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 UCHL1P09936 223 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 NR2F1P10589 423 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 IFNGR1P15260 489 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 HTR1FP30939 366 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 H2BFSP57053 126 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 HFEQ30201 348 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 PLEKHS1Q5SXH7 462 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 ADGRF1Q5T601 910 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 PIP5KL1Q5T9C9 394 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 LRRN1Q6UXK5 716 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 ASPGQ86U10 573 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 SERPINA12Q8IW75 414 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 PXT1Q8NFP0 134 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 ASZ1Q8WWH4 475 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 OR2A7Q96R45 310 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 GINS4Q9BRT9 223 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 DMRT3Q9NQL9 472 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 MED11Q9P086 117 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 EMC3Q9P0I2 261 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 TRPC4Q9UBN4 977 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 EDARQ9UNE0 448 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 PLXNA3P51805 1871 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 CREBL2O60519 120 aaPredicted RBP10.91□□□□□ -0.66
HDAC4-210ENST00000493582 PAICSP22234 425 aaKnown RBP10.91□□□□□ -0.66
HDAC4-210ENST00000493582 GPR4P46093 362 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 HAAOP46952 286 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 CTSCP53634 463 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 ACSM3Q53FZ2 586 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 PLBD1Q6P4A8 553 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 NAXDQ8IW45 347 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms