RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 DSPPQ9NZW4 1301 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 RELNP78509 3460 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 TRAV17A0A0B4J275 112 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 AGAP5A6NIR3 686 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 GTPBP1O00178 669 aaKnown RBP15.72■□□□□ 0.11
LIME1-208ENST00000493265 GNB5O14775 395 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 NDUFB5O43674 189 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 SERPINB7O75635 380 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 PDE9AO76083 593 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 ANGPTL1O95841 491 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 DBIP07108 87 aaKnown RBP15.72■□□□□ 0.11
LIME1-208ENST00000493265 GUSBP08236 651 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 ETS2P15036 469 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 GGT1P19440 569 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 RFC3P40938 356 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 MASP1P48740 699 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 PCBP3P57721 371 aaKnown RBP15.72■□□□□ 0.11
LIME1-208ENST00000493265 CD226Q15762 336 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 ZNF141Q15928 474 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 NDUFAF6Q330K2 333 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 KLHL26Q53HC5 615 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 ASRGL1Q7L266 308 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 PATL1Q86TB9 770 aaKnown RBP15.72■□□□□ 0.11
LIME1-208ENST00000493265 SULF2Q8IWU5 870 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 RBMXL3Q8N7X1 1067 aaKnown RBP15.72■□□□□ 0.11
LIME1-208ENST00000493265 SH3YL1Q96HL8 342 aaPredicted RBP15.72■□□□□ 0.11
LIME1-208ENST00000493265 SECISBP2Q96T21 854 aaKnown RBP15.72■□□□□ 0.11
LIME1-208ENST00000493265 SPATA5L1Q9BVQ7 753 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 DEPPQ9NTK1 212 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 RYDENQ9NUL5 291 aaKnown RBP15.72■□□□□ 0.11
LIME1-208ENST00000493265 ABCG2Q9UNQ0 655 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 ZNF232Q9UNY5 417 aa15.72■□□□□ 0.11
LIME1-208ENST00000493265 ZNF443Q9Y2A4 671 aaPredicted RBP15.72■□□□□ 0.11
LIME1-208ENST00000493265 GPC6Q9Y625 555 aaPredicted RBP15.72■□□□□ 0.11
LIME1-208ENST00000493265 PINLYPA6NC86 204 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 SERINC4A6NH21 518 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 H3BNH8 94 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 CDK2AP1O14519 115 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 ARPC2O15144 300 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 PEX1O43933 1283 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 NME2P1O60361 137 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 ZNF682O95780 498 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 NGFRP08138 427 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 PABPC4LP0CB38 370 aaKnown RBP15.71■□□□□ 0.11
LIME1-208ENST00000493265 CNR1P21554 472 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 NME2P22392 152 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 KDELR2P33947 212 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 PTGDSP41222 190 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 DMTNQ08495 405 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 BNIP2Q12982 314 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 ZNF169Q14929 603 aaPredicted RBP15.71■□□□□ 0.11
LIME1-208ENST00000493265 LARS2Q15031 903 aaKnown RBP15.71■□□□□ 0.11
LIME1-208ENST00000493265 INPP5JQ15735 1006 aaPredicted RBP15.71■□□□□ 0.11
LIME1-208ENST00000493265 SPATS1Q496A3 300 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 NADK2Q4G0N4 442 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 LIN52Q52LA3 116 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 SLC30A6Q6NXT4 461 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 CYP2R1Q6VVX0 501 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 ZNF836Q6ZNA1 936 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 YTHDF3Q7Z739 585 aaKnown RBP15.71■□□□□ 0.11
LIME1-208ENST00000493265 TMCO5AQ8N6Q1 288 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 TMEM178AQ8NBL3 297 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 OR10Q1Q8NGQ4 319 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 DUSP19Q8WTR2 217 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 TAMM41Q96BW9 452 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 ARSGQ96EG1 525 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 ANGPTL4Q9BY76 406 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 PROK2Q9HC23 129 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.71■□□□□ 0.11
LIME1-208ENST00000493265 RLIMQ9NVW2 624 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 PPP4R1LQ9P1A2 415 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 SUCOQ9UBS9 1254 aaKnown RBP15.71■□□□□ 0.11
LIME1-208ENST00000493265 MAGEL2Q9UJ55 1249 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 KLF13Q9Y2Y9 288 aaPredicted RBP15.71■□□□□ 0.11
LIME1-208ENST00000493265 IFT52Q9Y366 437 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 SNX13Q9Y5W8 968 aa15.71■□□□□ 0.11
LIME1-208ENST00000493265 ALG1L2C9J202 215 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 OIP5O43482 229 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 TPST1O60507 370 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 MFN2O95140 757 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 SERPINA1P01009 418 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 CSTAP01040 98 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 RPS4Y1P22090 263 aaKnown RBP15.7■□□□□ 0.1
LIME1-208ENST00000493265 MEOX1P50221 254 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 KCNJ10P78508 379 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 FOXK1P85037 733 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 MS4A2Q01362 244 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 PMP22Q01453 160 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 GLIPR1L2Q4G1C9 344 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 CYBRD1Q53TN4 286 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 MRPL2Q5T653 305 aaKnown RBP15.7■□□□□ 0.1
LIME1-208ENST00000493265 CCDC80Q76M96 950 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 EIF3MQ7L2H7 374 aaKnown RBP15.7■□□□□ 0.1
LIME1-208ENST00000493265 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.7■□□□□ 0.1
LIME1-208ENST00000493265 PACS2Q86VP3 889 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 SPPL2CQ8IUH8 684 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 OR2M7Q8NG81 312 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 PMM1Q92871 262 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 SCMH1Q96GD3 660 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 TPD52L3Q96J77 140 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms