RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 CLDN4O14493 209 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 MTNR1AP48039 350 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 MLLT11Q13015 90 aaPredicted RBP19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 C1DQ13901 141 aaKnown RBP19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 NKAIN2Q5VXU1 208 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 NPSR1Q6W5P4 371 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 CHPT1Q8WUD6 406 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 SHDQ96IW2 340 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 SAMD8Q96LT4 415 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 CDADC1Q9BWV3 514 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 TEX12Q9BXU0 123 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 DPH1Q9BZG8 443 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 CHRNA10Q9GZZ6 450 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 SPRTNQ9H040 489 aaPredicted RBP19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 MED17Q9NVC6 651 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 GALNT8Q9NY28 637 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 IL20RAQ9UHF4 553 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 CARD8Q9Y2G2 431 aa19.54■□□□□ 0.72
CCDC88B-208ENST00000492980 PCDH15Q96QU1 1955 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 UNC119BA6NIH7 251 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 APOL3O95236 402 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 MAOAP21397 527 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 ZNF267Q14586 743 aaPredicted RBP19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 TCTE1Q5JU00 501 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 AADACL4Q5VUY2 407 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 DCDC5Q6ZRR9 648 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 SIX5Q8N196 739 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 SDR16C5Q8N3Y7 309 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 OR2T33Q8NG76 320 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 BRIX1Q8TDN6 353 aaKnown RBP19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 ARSGQ96EG1 525 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 ZNF559Q9BR84 538 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 RAB33BQ9H082 229 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 EVA1AQ9H8M9 152 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 C20orf141Q9NUB4 165 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 C14orf105Q9NVL8 296 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 EPHA6Q9UF33 1036 aa19.53■□□□□ 0.72
CCDC88B-208ENST00000492980 FITM1A5D6W6 292 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 ZNF749O43361 778 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 ZGLP1P0C6A0 271 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 MAKP20794 623 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 BCKDHBP21953 392 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 GPR3P46089 330 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 CSNK1EP49674 416 aaKnown RBP19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 PRKCDQ05655 676 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 CENPSQ8N2Z9 138 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 SPEM1Q8N4L4 309 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 SPACA7Q96KW9 195 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 FAIMQ9NVQ4 179 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 NDUFB11Q9NX14 153 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 KLHL3Q9UH77 587 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 RNF215Q9Y6U7 377 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 ABCA7Q8IZY2 2146 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 RHPN2P1A8MT19 583 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 PRAMEF2O60811 474 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 PIAS2O75928 621 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 IFI30P13284 250 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 MYL12AP19105 171 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 GCGRP47871 477 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 EPHA4P54764 986 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 FXYD6P3P58550 94 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 RAB15P59190 212 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 RGS21Q2M5E4 152 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 ZNF613Q6PF04 617 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 HSDL2Q6YN16 418 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 GRAMD2AQ8IUY3 354 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 ZNF614Q8N883 585 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 OR51Q1Q8NH59 317 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 RNF217Q8TC41 542 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 ABTB1Q969K4 478 aaPredicted RBP19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 ZDHHC12Q96GR4 267 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 NELL2Q99435 816 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 UBQLN3Q9H347 655 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 ATP13A2Q9NQ11 1180 aa19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 SIDT1Q9NXL6 827 aaKnown RBP19.52■□□□□ 0.72
CCDC88B-208ENST00000492980 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 PFDN1O60925 122 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 SLC2A10O95528 541 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 FUT1P19526 365 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 CDH11P55287 796 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 HSD17B7P56937 341 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 ATP1A4Q13733 1029 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 CNPPD1Q9BV87 410 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 C6orf62Q9GZU0 229 aaPredicted RBP19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 OR52D1Q9H346 318 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 TMEM27Q9HBJ8 222 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 DNAJB12Q9NXW2 375 aaKnown RBP19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 FLRT3Q9NZU0 649 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 SEC14L4Q9UDX3 406 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 ERVK-19Q9WJR5 959 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 SPAG17Q6Q759 2223 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 ANKRD33BA6NCL7 494 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 H0YIG0 161 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 WWP2O00308 870 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 KPNA4O00629 521 aaPredicted RBP19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 HMGN1P05114 100 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 CRYBB2P43320 205 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 TMEM44Q2T9K0 475 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 AMZ1Q400G9 498 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 SHFQ7M4L6 423 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms