RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ME2P23368 584 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 CD79BP40259 229 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 KIR2DL2P43627 348 aaPredicted RBP7.43□□□□□ -1.22
LSM2-213ENST00000491421 EIF1AXP47813 144 aaKnown RBP7.43□□□□□ -1.22
LSM2-213ENST00000491421 KCNJ5P48544 419 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 CCT3P49368 545 aaKnown RBP7.43□□□□□ -1.22
LSM2-213ENST00000491421 OCRLQ01968 901 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 ZNF844Q08AG5 666 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 FAM27E3Q08E93 113 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 MAD2L1Q13257 205 aaPredicted RBP7.43□□□□□ -1.22
LSM2-213ENST00000491421 KEAP1Q14145 624 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 POU4F3Q15319 338 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 PGS1Q32NB8 556 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 LSM12Q3MHD2 195 aaKnown RBP7.43□□□□□ -1.22
LSM2-213ENST00000491421 EXOSC6Q5RKV6 272 aaKnown RBP7.43□□□□□ -1.22
LSM2-213ENST00000491421 CDC73Q6P1J9 531 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 PAMR1Q6UXH9 720 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 BTLAQ7Z6A9 289 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 GGNQ86UU5 652 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 WDR75Q8IWA0 830 aaKnown RBP7.43□□□□□ -1.22
LSM2-213ENST00000491421 ZNF527Q8NB42 609 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 B4GALNT2Q8NHY0 566 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 PSMA8Q8TAA3 256 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 SFXN5Q8TD22 340 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 ACTRT2Q8TDY3 377 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 ADAMTS15Q8TE58 950 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 ZBTB8AQ96BR9 441 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 MOAP1Q96BY2 351 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 COQ8BQ96D53 544 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 PGM2Q96G03 612 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 RNF145Q96MT1 663 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 ALPK1Q96QP1 1244 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 SLC39A3Q9BRY0 314 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 TMUB1Q9BVT8 246 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 ACTRT3Q9BYD9 372 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 PRRG4Q9BZD6 226 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 BHLHE41Q9C0J9 482 aaPredicted RBP7.43□□□□□ -1.22
LSM2-213ENST00000491421 PIGUQ9H490 435 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 CXorf36Q9H7Y0 433 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 NEUROD4Q9HD90 331 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 MED17Q9NVC6 651 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 GIN1Q9NXP7 522 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 NOP53Q9NZM5 478 aaKnown RBP7.43□□□□□ -1.22
LSM2-213ENST00000491421 TESMINQ9Y4I5 508 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 NF1P21359 2839 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 MTORP42345 2549 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 MED12Q93074 2177 aa7.43□□□□□ -1.22
LSM2-213ENST00000491421 MAP1AP78559 2803 aaPredicted RBP7.42□□□□□ -1.22
LSM2-213ENST00000491421 C7orf72A4D263 438 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 H3BNH8 94 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 BIRC5O15392 142 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 ITM2AO43736 263 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 AQP8O94778 261 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 SOX30O94993 753 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 ATE1O95260 518 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 SYNGR4O95473 234 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 PLGP00747 810 aaPredicted RBP7.42□□□□□ -1.22
LSM2-213ENST00000491421 CGAP01215 116 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 OPN1LWP04000 364 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 HRGP04196 525 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 MYZAPP0CAP1 466 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 CD8BP10966 210 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 CD99P14209 185 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 POU2F1P14859 743 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 SOAT1P35610 550 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 UGT2B10P36537 528 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 SLC6A8P48029 635 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 PCYT1AP49585 367 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 RNF144AP50876 292 aaPredicted RBP7.42□□□□□ -1.22
LSM2-213ENST00000491421 ABCE1P61221 599 aaKnown RBP7.42□□□□□ -1.22
LSM2-213ENST00000491421 RAC1P63000 192 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 PPP2R2AP63151 447 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 ZNF117Q03924 483 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 EMX2Q04743 252 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 GUSBP1Q15486 140 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 CD226Q15762 336 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 CHI3L2Q15782 390 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 PDCD2Q16342 344 aaPredicted RBP7.42□□□□□ -1.22
LSM2-213ENST00000491421 PLPPR5Q32ZL2 321 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 DCST2Q5T1A1 773 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 PDSS1Q5T2R2 415 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 BHLHB9Q6PI77 547 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 ZNF474Q6S9Z5 364 aaPredicted RBP7.42□□□□□ -1.22
LSM2-213ENST00000491421 FAM214BQ7L5A3 538 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 CAMKMTQ7Z624 323 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 MTERF4Q7Z6M4 381 aaKnown RBP7.42□□□□□ -1.22
LSM2-213ENST00000491421 RIMKLAQ8IXN7 391 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 ZNF781Q8N8C0 355 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 OR10D3Q8NH80 312 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 OR5AK3PQ8NH89 298 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 PHOSPHO1Q8TCT1 267 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 NUDT8Q8WV74 236 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 MBD6Q96DN6 1003 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 PPP1R36Q96LQ0 422 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 ZIM3Q96PE6 472 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 NPAS1Q99742 590 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 MED18Q9BUE0 208 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 DUSP26Q9BV47 211 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 PARD6BQ9BYG5 372 aa7.42□□□□□ -1.22
LSM2-213ENST00000491421 HOXD1Q9GZZ0 328 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms