RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PINK1Q9BXM7 581 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 PNPOQ9NVS9 261 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 GPATCH2Q9NW75 528 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 FBXO34Q9NWN3 711 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 CRIM1Q9NZV1 1036 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 PACSIN3Q9UKS6 424 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 ZNF175Q9Y473 711 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 UQCRHLA0A096LP55 91 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 TRPC5OSA6NMA1 111 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 NUDT14O95848 222 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 AK1P00568 194 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 FCGR2AP12318 317 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 MAGOHP61326 146 aaKnown RBP15.74■□□□□ 0.11
SEC13-218ENST00000490283 FBXW10Q5XX13 1052 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 PPP4R4Q6NUP7 873 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 PLXDC2Q6UX71 529 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 CLECL1Q8IZS7 167 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 ZNF614Q8N883 585 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 CNEP1R1Q8N9A8 125 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 TESCQ96BS2 214 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 SLC35G5Q96KT7 338 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 OR7D2Q96RA2 312 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 PRRG4Q9BZD6 226 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 EXD2Q9NVH0 621 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 PAQR5Q9NXK6 330 aaPredicted RBP15.74■□□□□ 0.11
SEC13-218ENST00000490283 JKAMPQ9P055 326 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 ADGRG4Q8IZF6 3080 aa15.74■□□□□ 0.11
SEC13-218ENST00000490283 PRSS51A0A1B0GVH4 220 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 A0A1W2PNV4 684 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 SLCO1B7G3V0H7 640 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 GTPBP1O00178 669 aaKnown RBP15.73■□□□□ 0.11
SEC13-218ENST00000490283 EIF1AYO14602 144 aaKnown RBP15.73■□□□□ 0.11
SEC13-218ENST00000490283 TGM6O95932 706 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 AGR2O95994 175 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 MATN1P21941 496 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 SLC18A1P54219 525 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 ATP12AP54707 1039 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 CLDN15P56746 228 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 CLDN20P56880 219 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 OCRLQ01968 901 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 FGFBP1Q14512 234 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 BEND6Q5SZJ8 279 aaPredicted RBP15.73■□□□□ 0.11
SEC13-218ENST00000490283 OGFOD2Q6N063 350 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 C6orf120Q7Z4R8 191 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 SPATA19Q7Z5L4 167 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 GTPBP8Q8N3Z3 284 aaPredicted RBP15.73■□□□□ 0.11
SEC13-218ENST00000490283 METTL25Q8N6Q8 603 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 ZBTB18Q99592 522 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 POLDIP3Q9BY77 421 aaKnown RBP15.73■□□□□ 0.11
SEC13-218ENST00000490283 MED17Q9NVC6 651 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 DNAJB12Q9NXW2 375 aaKnown RBP15.73■□□□□ 0.11
SEC13-218ENST00000490283 EDARQ9UNE0 448 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 MED12Q93074 2177 aa15.73■□□□□ 0.11
SEC13-218ENST00000490283 LRBAP50851 2863 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 C7orf72A4D263 438 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 SHISA8B8ZZ34 492 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 E9PBE3 544 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 HDAC3O15379 428 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 SMNDC1O75940 238 aaKnown RBP eCLIP15.72■□□□□ 0.11
SEC13-218ENST00000490283 CPSF4O95639 269 aaKnown RBP15.72■□□□□ 0.11
SEC13-218ENST00000490283 UQCRC2P22695 453 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 S100A3P33764 101 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 CPOXP36551 454 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 EIF1P41567 113 aaKnown RBP15.72■□□□□ 0.11
SEC13-218ENST00000490283 EIF1AXP47813 144 aaKnown RBP15.72■□□□□ 0.11
SEC13-218ENST00000490283 SUCLG1P53597 346 aaKnown RBP15.72■□□□□ 0.11
SEC13-218ENST00000490283 WDR4P57081 412 aaKnown RBP15.72■□□□□ 0.11
SEC13-218ENST00000490283 PON3Q15166 354 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 CD226Q15762 336 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 TMEM44Q2T9K0 475 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 PLPPR5Q32ZL2 321 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 PDSS1Q5T2R2 415 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 ATAD3BQ5T9A4 648 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 C16orf62Q7Z3J2 963 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 ANKRD46Q86W74 232 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 OR5D16Q8NGK9 328 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 FIG4Q92562 907 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 RNF145Q96MT1 663 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 TMBIM4Q9HC24 238 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 GALNT8Q9NY28 637 aa15.72■□□□□ 0.11
SEC13-218ENST00000490283 MARCOQ9UEW3 520 aaPredicted RBP15.72■□□□□ 0.11
SEC13-218ENST00000490283 FBN2P35556 2912 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 NPIPA5A0A0B4J1W7 369 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 NPIPA7E9PJI5 369 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 H0YC42 278 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 MSTNO14793 375 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 STX11O75558 287 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 CTAG2O75638 210 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 SYNGR4O95473 234 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 NPIPA8P0DM63 369 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 KITP10721 976 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 CHI3L1P36222 383 aaPredicted RBP15.71■□□□□ 0.11
SEC13-218ENST00000490283 P2RX1P51575 399 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 TPD52P55327 224 aaPredicted RBP15.71■□□□□ 0.11
SEC13-218ENST00000490283 SUMO3P55854 103 aaPredicted RBP15.71■□□□□ 0.11
SEC13-218ENST00000490283 RPS26P62854 115 aaKnown RBP15.71■□□□□ 0.11
SEC13-218ENST00000490283 RAC1P63000 192 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 ZNF117Q03924 483 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 FAM174BQ3ZCQ3 159 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 KLHL26Q53HC5 615 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms