RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CPN1P15169 458 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 RPS4Y1P22090 263 aaKnown RBP10.06□□□□□ -0.8
CPSF7-212ENST00000489728 P2RX1P51575 399 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 SEC24CP53992 1094 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 NFYCQ13952 458 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 UBAP2LQ14157 1087 aaKnown RBP10.06□□□□□ -0.8
CPSF7-212ENST00000489728 FGFBP1Q14512 234 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 GPR68Q15743 365 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 CD226Q15762 336 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 BCL2A1Q16548 175 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 C3AR1Q16581 482 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 TRMT5Q32P41 509 aaKnown RBP10.06□□□□□ -0.8
CPSF7-212ENST00000489728 GTDC1Q4AE62 458 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 C1QL3Q5VWW1 255 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 ENPP6Q6UWR7 440 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 EIF3MQ7L2H7 374 aaKnown RBP10.06□□□□□ -0.8
CPSF7-212ENST00000489728 DHDDSQ86SQ9 333 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 CD163Q86VB7 1156 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 MSRB3Q8IXL7 192 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 PCYOX1LQ8NBM8 494 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 FAM71CQ8NEG0 241 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 B4GALNT2Q8NHY0 566 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 PNPT1Q8TCS8 783 aaKnown RBP10.06□□□□□ -0.8
CPSF7-212ENST00000489728 PHOSPHO1Q8TCT1 267 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 ZBTB8AQ96BR9 441 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 ARSGQ96EG1 525 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 AURKBQ96GD4 344 aaPredicted RBP10.06□□□□□ -0.8
CPSF7-212ENST00000489728 CGREF1Q99674 301 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 SH3GL1Q99961 368 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 ELAC2Q9BQ52 826 aaKnown RBP10.06□□□□□ -0.8
CPSF7-212ENST00000489728 PIGQQ9BRB3 760 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 CPPED1Q9BRF8 314 aaPredicted RBP10.06□□□□□ -0.8
CPSF7-212ENST00000489728 SLC38A1Q9H2H9 487 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 DSN1Q9H410 356 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 TMEM38AQ9H6F2 299 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 EXOSC3Q9NQT5 275 aaKnown RBP10.06□□□□□ -0.8
CPSF7-212ENST00000489728 VAPAQ9P0L0 249 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 SPRR3Q9UBC9 169 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 STOML1Q9UBI4 398 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.06□□□□□ -0.8
CPSF7-212ENST00000489728 ACAD8Q9UKU7 415 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 MKLN1Q9UL63 735 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 MEMO1Q9Y316 297 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 HRH3Q9Y5N1 445 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 ZNF407Q9C0G0 2248 aa10.06□□□□□ -0.8
CPSF7-212ENST00000489728 C15orf38-AP3S2A0A0A6YYH1 394 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 A0A0G2JPF8 293 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 PRAMEF27A3QJZ7 478 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 AHRRA9YTQ3 701 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 HNRNPCL2B2RXH8 293 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 B4DXG7 233 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 HNRNPCL3B7ZW38 293 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 NPIPA2E9PIF3 369 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 NPIPA3F8WFD2 350 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 GTPBP1O00178 669 aaKnown RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 CCL21O00585 134 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ZNF264O43296 627 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 HCRTR2O43614 444 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ZIC3O60481 467 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 HNRNPCL1O60812 293 aaKnown RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 DNAJA2O60884 412 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 TNFRSF21O75509 655 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ZIC2O95409 532 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 LDLRP01130 860 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 DBIP07108 87 aaKnown RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 THBS1P07996 1170 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 CHRM4P08173 479 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 HNRNPCL4P0DMR1 293 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 AGAP20933 346 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ACVR2AP27037 513 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ADH6P28332 368 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 EIF1P41567 113 aaKnown RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ZNF41P51814 821 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 CASP9P55211 416 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ZNF117Q03924 483 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 RBBP4Q09028 425 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 CYLC2Q14093 348 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 SYPL1Q16563 259 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 TMEM44Q2T9K0 475 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 GXYLT1Q4G148 440 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 EIPR1Q53HC9 387 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 RUNDC3AQ59EK9 446 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 EMC4Q5J8M3 183 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 WIPI1Q5MNZ9 446 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 PDZK1Q5T2W1 519 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 TMEM211Q6ICI0 200 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 OR5M10Q6IEU7 315 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 YRDCQ86U90 279 aaKnown RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 RETREG3Q86VR2 466 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 PEX5LQ8IYB4 626 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 GTPBP8Q8N3Z3 284 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ANKFN1Q8N957 763 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 OR8J3Q8NGG0 315 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 RP9Q8TA86 221 aaKnown RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 BBS10Q8TAM1 723 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 SSC4DQ8WTU2 575 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 SLC38A5Q8WUX1 472 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ABTB1Q969K4 478 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 SFXN2Q96NB2 322 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ANKRD27Q96NW4 1050 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms