RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 RFC2P35250 354 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 HNMTP50135 292 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 METAP1P53582 386 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 WNT4P56705 351 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 NOP14P78316 857 aaKnown RBP2.37□□□□□ -2.03
RFC4-213ENST00000489028 SRYQ05066 204 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 PUDPQ08623 228 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 PRR4Q16378 134 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 LRIT3Q3SXY7 679 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 NADK2Q4G0N4 442 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 LRRC23Q53EV4 343 aaPredicted RBP2.37□□□□□ -2.03
RFC4-213ENST00000489028 OTPQ5XKR4 325 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 SULT1C3Q6IMI6 304 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 NIPAL3Q6P499 406 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 RGS9BPQ6ZS82 235 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 TMEM110Q86TL2 294 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 MCOLN2Q8IZK6 566 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 CENPSQ8N2Z9 138 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 ZNF397Q8NF99 534 aaPredicted RBP2.37□□□□□ -2.03
RFC4-213ENST00000489028 ADAMTS16Q8TE57 1224 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 SETD7Q8WTS6 366 aaKnown RBP2.37□□□□□ -2.03
RFC4-213ENST00000489028 RNF138Q8WVD3 245 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 MCHR2Q969V1 340 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 VPS35Q96QK1 796 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 SDHCQ99643 169 aaPredicted RBP2.37□□□□□ -2.03
RFC4-213ENST00000489028 ERP44Q9BS26 406 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 MRPL13Q9BYD1 178 aaKnown RBP2.37□□□□□ -2.03
RFC4-213ENST00000489028 POLR1EQ9GZS1 481 aaKnown RBP2.37□□□□□ -2.03
RFC4-213ENST00000489028 RMND5AQ9H871 391 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 PALMDQ9NP74 551 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 EXOSC3Q9NQT5 275 aaKnown RBP2.37□□□□□ -2.03
RFC4-213ENST00000489028 GDAP2Q9NXN4 497 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 BARX2Q9UMQ3 279 aaPredicted RBP2.37□□□□□ -2.03
RFC4-213ENST00000489028 FKBP7Q9Y680 259 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 CUX2O14529 1486 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 ATAD2BQ9ULI0 1458 aa2.37□□□□□ -2.03
RFC4-213ENST00000489028 A8MUI8 341 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 WASH3PC4AMC7 463 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 EMC8O43402 210 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 LANCL1O43813 399 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 ASNSP08243 561 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 ANXA4P09525 319 aaPredicted RBP2.36□□□□□ -2.03
RFC4-213ENST00000489028 UQCRBP14927 111 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 ZNF32P17041 273 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 MDKP21741 143 aaPredicted RBP2.36□□□□□ -2.03
RFC4-213ENST00000489028 PTGFRP43088 359 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 GBX2P52951 348 aaPredicted RBP2.36□□□□□ -2.03
RFC4-213ENST00000489028 UCNP55089 124 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 OSTNP61366 133 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 IL9RQ01113 521 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 BNIP1Q12981 228 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 EIF2B1Q14232 305 aaKnown RBP2.36□□□□□ -2.03
RFC4-213ENST00000489028 IL17AQ16552 155 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 TATDN3Q17R31 274 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 CCDC57Q2TAC2 916 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 CFAP157Q5JU67 520 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 SPATA46Q5T0L3 261 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 ZNF57Q68EA5 555 aaPredicted RBP2.36□□□□□ -2.03
RFC4-213ENST00000489028 PNCKQ6P2M8 343 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 CASC1Q6TDU7 716 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 WASH2PQ6VEQ5 465 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 CENPUQ71F23 418 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 MOB1BQ7L9L4 216 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 ERASQ7Z444 233 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 CBWD2Q8IUF1 395 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 CCDC36Q8IYA8 594 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 ZNF606Q8WXB4 792 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 N4BP2L2Q92802 583 aaPredicted RBP2.36□□□□□ -2.03
RFC4-213ENST00000489028 FAM104AQ969W3 186 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 SLC25A36Q96CQ1 311 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 HPDLQ96IR7 371 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 TBCDQ9BTW9 1192 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 RAB33BQ9H082 229 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 KAT8Q9H7Z6 458 aaKnown RBP2.36□□□□□ -2.03
RFC4-213ENST00000489028 TRPV5Q9NQA5 729 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 ZNF221Q9UK13 617 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 FZR1Q9UM11 496 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 PDE10AQ9Y233 779 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 KIF16BQ96L93 1317 aa2.36□□□□□ -2.03
RFC4-213ENST00000489028 RAI1Q7Z5J4 1906 aaPredicted RBP2.35□□□□□ -2.03
RFC4-213ENST00000489028 TRBV7-9A0A0J9YWB2 115 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 TTC26A0AVF1 554 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 PINLYPA6NC86 204 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 RNF222A6NCQ9 220 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 HMMRO75330 724 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 PGK1P00558 417 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 OPN1MWP04001 364 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 CSF2P04141 144 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 OPN1MW2P0DN77 364 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 OPN1MW3P0DN78 364 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 ZNF17P17021 662 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 SDC1P18827 310 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 TSPAN8P19075 237 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 PSMA2P25787 234 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 STK19P49842 368 aaPredicted RBP2.35□□□□□ -2.03
RFC4-213ENST00000489028 ARFIP1P53367 373 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 NUCB2P80303 420 aa2.35□□□□□ -2.03
RFC4-213ENST00000489028 MRPS6P82932 125 aaKnown RBP2.35□□□□□ -2.03
RFC4-213ENST00000489028 SNTB2Q13425 540 aaKnown RBP2.35□□□□□ -2.03
RFC4-213ENST00000489028 HERPUD1Q15011 391 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms