RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ULK2Q8IYT8 1036 aa13.66□□□□□ -0.22
CXCL12-207ENST00000488591 ITLN2Q8WWU7 325 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-207ENST00000488591 OIT3Q8WWZ8 545 aa13.66□□□□□ -0.22
CXCL12-207ENST00000488591 RND1Q92730 232 aa13.66□□□□□ -0.22
CXCL12-207ENST00000488591 SH3YL1Q96HL8 342 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-207ENST00000488591 TRNT1Q96Q11 434 aaKnown RBP13.66□□□□□ -0.22
CXCL12-207ENST00000488591 PIGQQ9BRB3 760 aa13.66□□□□□ -0.22
CXCL12-207ENST00000488591 PRDM14Q9GZV8 571 aa13.66□□□□□ -0.22
CXCL12-207ENST00000488591 PAIP1Q9H074 479 aaKnown RBP13.66□□□□□ -0.22
CXCL12-207ENST00000488591 SLC6A13Q9NSD5 602 aa13.66□□□□□ -0.22
CXCL12-207ENST00000488591 KLHL14Q9P2G3 628 aa13.66□□□□□ -0.22
CXCL12-207ENST00000488591 STOML1Q9UBI4 398 aa13.66□□□□□ -0.22
CXCL12-207ENST00000488591 PCDHB14Q9Y5E9 798 aa13.66□□□□□ -0.22
CXCL12-207ENST00000488591 DOPEY2Q9Y3R5 2298 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 A1L4Q6 167 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 CLIC1O00299 241 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 NUDT14O95848 222 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 NR2F1P10589 423 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 CPN1P15169 458 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 CAPN3P20807 821 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 PPIBP23284 216 aaKnown RBP13.65□□□□□ -0.22
CXCL12-207ENST00000488591 GFRA1P56159 465 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 GNA13Q14344 377 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 CD226Q15762 336 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 ZNF141Q15928 474 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 COX20Q5RI15 118 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.65□□□□□ -0.22
CXCL12-207ENST00000488591 PDZK1Q5T2W1 519 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 MAMDC2Q7Z304 686 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-207ENST00000488591 OR10Q1Q8NGQ4 319 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 TSPEARQ8WU66 669 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 ASB5Q8WWX0 329 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 PMM1Q92871 262 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 WDYHV1Q96HA8 205 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 TTYH2Q9BSA4 534 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 ZNF385DQ9H6B1 395 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 CALML5Q9NZT1 146 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 P2RX2Q9UBL9 471 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 LEF1Q9UJU2 399 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-207ENST00000488591 CARD8Q9Y2G2 431 aa13.65□□□□□ -0.22
CXCL12-207ENST00000488591 DOPEY1Q5JWR5 2465 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 SERINC4A6NH21 518 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 B4DXG7 233 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 H0Y3Z8 333 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 ANGPT2O15123 496 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 ZNF264O43296 627 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 KIAA0513O60268 411 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 EIF4E2O60573 245 aaKnown RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 UGT2B17O75795 530 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 H6PDO95479 791 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 C1QCP02747 245 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 SNRPB2P08579 225 aaKnown RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 UBL4AP11441 157 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 PEPDP12955 493 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 P2RX1P51575 399 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 SUMO3P55854 103 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 NUP107P57740 925 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 EEFSECP57772 596 aaKnown RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 DSTNP60981 165 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 SRYQ05066 204 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 SF3A3Q12874 501 aaKnown RBP eCLIP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 ART3Q13508 389 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 BCL2A1Q16548 175 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 SYPL1Q16563 259 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 GTDC1Q4AE62 458 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 AP1ARQ63HQ0 302 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 TYW3Q6IPR3 259 aaKnown RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 ARSKQ6UWY0 536 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 LRRC74BQ6ZQY2 392 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 NCCRP1Q6ZVX7 275 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 EIF3MQ7L2H7 374 aaKnown RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 CHMP1BQ7LBR1 199 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 ZNF619Q8N2I2 560 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 MARVELD2Q8N4S9 558 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 TMCO5AQ8N6Q1 288 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 ZBTB8AQ96BR9 441 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 AURKBQ96GD4 344 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 ZNF317Q96PQ6 595 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 SAP130Q9H0E3 1048 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 MTHFD2LQ9H903 347 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 SLC52A3Q9NQ40 469 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 PLEKHB1Q9UF11 243 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-207ENST00000488591 CORO2BQ9UQ03 480 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 VDAC3Q9Y277 283 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 NDUFAF1Q9Y375 327 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 FAM215AQ9Y5M1 114 aa13.64□□□□□ -0.23
CXCL12-207ENST00000488591 USP9YO00507 2555 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-207ENST00000488591 OR2M5A3KFT3 312 aa13.63□□□□□ -0.23
CXCL12-207ENST00000488591 EVPLLA8MZ36 301 aa13.63□□□□□ -0.23
CXCL12-207ENST00000488591 TNFRSF21O75509 655 aa13.63□□□□□ -0.23
CXCL12-207ENST00000488591 EPPINO95925 133 aa13.63□□□□□ -0.23
CXCL12-207ENST00000488591 CSTAP01040 98 aa13.63□□□□□ -0.23
CXCL12-207ENST00000488591 GLI4P10075 376 aa13.63□□□□□ -0.23
CXCL12-207ENST00000488591 GP1BBP13224 206 aa13.63□□□□□ -0.23
CXCL12-207ENST00000488591 ETFAP13804 333 aa13.63□□□□□ -0.23
CXCL12-207ENST00000488591 ZNF17P17021 662 aa13.63□□□□□ -0.23
CXCL12-207ENST00000488591 POU3F2P20265 443 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-207ENST00000488591 CHRNB4P30926 498 aa13.63□□□□□ -0.23
CXCL12-207ENST00000488591 ADH7P40394 386 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms