RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 MYZAPP0CAP1 466 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 G6PDP11413 515 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 KIR2DL2P43627 348 aaPredicted RBP17.18■□□□□ 0.34
CLIP2-206ENST00000487091 FGFBP1Q14512 234 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 PON3Q15166 354 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 MTERF4Q7Z6M4 381 aaKnown RBP17.18■□□□□ 0.34
CLIP2-206ENST00000487091 CROCCP2Q86T23 111 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 KIRREL3Q8IZU9 778 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 CNEP1R1Q8N9A8 125 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 GATSQ8NAP1 163 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 FNDC9Q8TBE3 224 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 ADAMTS15Q8TE58 950 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 NUDT8Q8WV74 236 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 SMPDL3BQ92485 455 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 ZBTB8AQ96BR9 441 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 CHMP6Q96FZ7 201 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 DUSP26Q9BV47 211 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 HOXD1Q9GZZ0 328 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 GPATCH2Q9NW75 528 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 RAP2CQ9Y3L5 183 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 ACTL7BQ9Y614 415 aa17.18■□□□□ 0.34
CLIP2-206ENST00000487091 SHISA8B8ZZ34 492 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 FCGR2AP12318 317 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 ATP6V1C1P21283 382 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 TP53BP2Q13625 1128 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 PLPPR5Q32ZL2 321 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 SPDYE7PQ495Y7 208 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 BHLHB9Q6PI77 547 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 GGNQ86UU5 652 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 WDR75Q8IWA0 830 aaKnown RBP17.17■□□□□ 0.34
CLIP2-206ENST00000487091 ZNF781Q8N8C0 355 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 B4GALNT2Q8NHY0 566 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 PGM2Q96G03 612 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 ZNF845Q96IR2 970 aaPredicted RBP17.17■□□□□ 0.34
CLIP2-206ENST00000487091 FOXC2Q99958 501 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 CXXC4Q9H2H0 198 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 LIME1Q9H400 295 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 ZNF395Q9H8N7 513 aaPredicted RBP17.17■□□□□ 0.34
CLIP2-206ENST00000487091 MED17Q9NVC6 651 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 PAQR5Q9NXK6 330 aaPredicted RBP17.17■□□□□ 0.34
CLIP2-206ENST00000487091 NDRG3Q9UGV2 375 aa17.17■□□□□ 0.34
CLIP2-206ENST00000487091 HRNRQ86YZ3 2850 aaPredicted RBP17.16■□□□□ 0.34
CLIP2-206ENST00000487091 SH3D21A4FU49 640 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 CFLARO15519 480 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLIP2-206ENST00000487091 PSMA4P25789 261 aaKnown RBP17.16■□□□□ 0.34
CLIP2-206ENST00000487091 RPL14P50914 215 aaKnown RBP17.16■□□□□ 0.34
CLIP2-206ENST00000487091 ZNF41P51814 821 aaPredicted RBP17.16■□□□□ 0.34
CLIP2-206ENST00000487091 RAC1P63000 192 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 HBA1P69905 142 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 GUSBP1Q15486 140 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 PDCD2Q16342 344 aaPredicted RBP17.16■□□□□ 0.34
CLIP2-206ENST00000487091 SGCBQ16585 318 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 KLHL26Q53HC5 615 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 CEP85LQ5SZL2 805 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 DCST2Q5T1A1 773 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 FBXW10Q5XX13 1052 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 VWA1Q6PCB0 445 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 BTLAQ7Z6A9 289 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 ZNF527Q8NB42 609 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 C20orf27Q9GZN8 174 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 AKTIPQ9H8T0 292 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 CCM2LQ9NUG4 571 aaPredicted RBP17.16■□□□□ 0.34
CLIP2-206ENST00000487091 HAO1Q9UJM8 370 aa17.16■□□□□ 0.34
CLIP2-206ENST00000487091 PRRC2AP48634 2157 aaKnown RBP17.16■□□□□ 0.34
CLIP2-206ENST00000487091 ADAMDEC1O15204 470 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 CGAP01215 116 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 CD8BP10966 210 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 DNASE1P24855 282 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 SLC1A6P48664 564 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 ATP12AP54707 1039 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 CD226Q15762 336 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 PGS1Q32NB8 556 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 LRRC34Q8IZ02 419 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 SH3YL1Q96HL8 342 aaPredicted RBP17.15■□□□□ 0.34
CLIP2-206ENST00000487091 ADGRG7Q96K78 797 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 SORT1Q99523 831 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 SLC39A3Q9BRY0 314 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 CENPHQ9H3R5 247 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 ELOVL5Q9NYP7 299 aa17.15■□□□□ 0.34
CLIP2-206ENST00000487091 ITPR3Q14573 2671 aa17.14■□□□□ 0.34
CLIP2-206ENST00000487091 H3BNH8 94 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 RNASET2O00584 256 aaKnown RBP17.14■□□□□ 0.33
CLIP2-206ENST00000487091 EIF1AYO14602 144 aaKnown RBP17.14■□□□□ 0.33
CLIP2-206ENST00000487091 CASKO14936 926 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 AQP8O94778 261 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 CPOXP36551 454 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 CD79BP40259 229 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 EIF1P41567 113 aaKnown RBP17.14■□□□□ 0.33
CLIP2-206ENST00000487091 EIF1AXP47813 144 aaKnown RBP17.14■□□□□ 0.33
CLIP2-206ENST00000487091 FAM27E3Q08E93 113 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 MPP2Q14168 576 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 CTU2Q2VPK5 515 aaKnown RBP17.14■□□□□ 0.33
CLIP2-206ENST00000487091 ZNF474Q6S9Z5 364 aaPredicted RBP17.14■□□□□ 0.33
CLIP2-206ENST00000487091 ESPNLQ6ZVH7 1005 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 OR8J2Q8NGG1 315 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 PHOSPHO1Q8TCT1 267 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 RNF145Q96MT1 663 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 OR7D2Q96RA2 312 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 NPAS1Q99742 590 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms