RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 GSTK1Q9Y2Q3 226 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 CSNK1G3Q9Y6M4 447 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 CDHR4A6H8M9 788 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 C10orf142B7Z368 130 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 PEX12O00623 359 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 LRRTM2O43300 516 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 FMO6PO60774 539 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 ATP6V1G1O75348 118 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 LYPD3O95274 346 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 SEMA4FO95754 770 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 ZGLP1P0C6A0 271 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 PTNP21246 168 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 TPTEP56180 551 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 FABP5Q01469 135 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 ACSM1Q08AH1 577 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 ZNF155Q12901 538 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 WDR88Q6ZMY6 472 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 ABI3BPQ7Z7G0 1075 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 KLHL36Q8N4N3 616 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 FAM181AQ8N9Y4 354 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 PSD4Q8NDX1 1056 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 CHAC2Q8WUX2 184 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 PMM1Q92871 262 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 GSDMCQ9BYG8 508 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 OR52D1Q9H346 318 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 TCEAL2Q9H3H9 227 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 ABCB9Q9NP78 766 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 TRPV5Q9NQA5 729 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 HINT3Q9NQE9 182 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 H2AFY2Q9P0M6 372 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 CD207Q9UJ71 328 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 NPIPA5A0A0B4J1W7 369 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 KIR2DS5A0A0G2JLQ3 304 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 A0A0G2JNG1 304 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 TRDV1A0A1B0GX56 115 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 NPIPA7E9PJI5 369 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 KIR2DS3K7RE56 304 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 CHST10O43529 356 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 LALBAP00709 142 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 CT62P0C5K7 136 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 NPIPA8P0DM63 369 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 KIR2DS5Q14953 304 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 EXOSC7Q15024 291 aaKnown RBP16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 ZMAT1Q5H9K5 638 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 CXXC5Q7LFL8 322 aaKnown RBP16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 AKAP14Q86UN6 197 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 CPOQ8IVL8 374 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 ZFP41Q8N8Y5 198 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 OR52N1Q8NH53 320 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 SLC37A2Q8TED4 501 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 TMEM239Q8WW34 195 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 KATNB1Q9BVA0 655 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 DPH1Q9BZG8 443 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 MIXL1Q9H2W2 232 aa16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 SIDT1Q9NXL6 827 aaKnown RBP16.69■□□□□ 0.26
PDLIM7-207ENST00000486828 OR5K4A6NMS3 321 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 PRAMEF26H0Y7S4 382 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 SOCS6O14544 535 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 AKAP8O43823 692 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 MAKP20794 623 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 TMED10P49755 219 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 POU6F2P78424 691 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 GLYR1Q49A26 553 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 FIGNL1Q6PIW4 674 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 GID4Q8IVV7 300 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 SFTPA2Q8IWL1 248 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 SYT14Q8NB59 555 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 PFN4Q8NHR9 129 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 FANK1Q8TC84 345 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 CTHRC1Q96CG8 243 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 HS6ST2Q96MM7 605 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 COQ7Q99807 217 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 UBE2ZQ9H832 354 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 POLE3Q9NRF9 147 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 MMP17Q9ULZ9 603 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 ARHGEF17Q96PE2 2063 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 A0A1W2PQL4 384 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 TMEM221A6NGB7 291 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 SSX4O60224 188 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 BRINP1O60477 761 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 IFI30P13284 250 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 GABRA3P34903 492 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 RAB38P57729 211 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 VSX2P58304 361 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 FXYD6P3P58550 94 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 BAK1Q16611 211 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 CELF2-AS1Q8N7Q2 184 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 OR52L1Q8NGH7 329 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 AP3S1Q92572 193 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 ANKRD9Q96BM1 317 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 SECISBP2Q96T21 854 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 CD180Q99467 661 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 FN3KQ9H479 309 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 TNFRSF10DQ9UBN6 386 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 PCDHGB2Q9Y5G2 931 aa16.68■□□□□ 0.26
PDLIM7-207ENST00000486828 GXYLT2A0PJZ3 443 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 J3QRE1 110 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 BHLHE40O14503 412 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 IGHV4-34P06331 123 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 CELA2BP08218 269 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms