RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 LSRQ86X29 649 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 IFNL1Q8IU54 200 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 CDH26Q8IXH8 852 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 LILRA3Q8N6C8 439 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 OR5D16Q8NGK9 328 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ASZ1Q8WWH4 475 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 XAGE5Q8WWM1 108 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 KAT2AQ92830 837 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 GCDHQ92947 438 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ELP4Q96EB1 424 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 PRRC1Q96M27 445 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 YIPF4Q9BSR8 244 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 IFT27Q9BW83 186 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF768Q9H5H4 540 aaKnown RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 H2AFY2Q9P0M6 372 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 RNF181Q9P0P0 153 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 MLXQ9UH92 298 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ERVK-19Q9WJR5 959 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 KCNK7Q9Y2U2 307 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 SLC6A5Q9Y345 797 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 KIF26AQ9ULI4 1882 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 A0A1W2PPK0 400 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 OR6C75A6NL08 312 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 NPC1O15118 1278 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 SNAPC5O75971 98 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 IGF2P01344 180 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 CPN1P15169 458 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ANXA7P20073 488 aaKnown RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 XPAP23025 273 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 RECQLP46063 649 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 PREPP48147 710 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 CNTN1Q12860 1018 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 UBXN2BQ14CS0 331 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 SPOUT1Q5T280 376 aaKnown RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 FAM69AQ5T7M9 428 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 CDC73Q6P1J9 531 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ZC3H14Q6PJT7 736 aaKnown RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 TPRG1Q6ZUI0 275 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 CPOQ8IVL8 374 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ACBD7Q8N6N7 88 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 TMEM99Q8N816 258 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 RELL2Q8NC24 303 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 SMIM4Q8WVI0 70 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ALG14Q96F25 216 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 JAM3Q9BX67 310 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ANKRD19PQ9H560 264 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 NOX3Q9HBY0 568 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 HINT3Q9NQE9 182 aaKnown RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 C5AR2Q9P296 337 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 MRTO4Q9UKD2 239 aaKnown RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 VWA8A3KMH1 1905 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 TYRP14679 529 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 NPPBP16860 134 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 MEOX2P50222 304 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 MC2RQ01718 297 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 FGL2Q14314 439 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 KCNA10Q16322 511 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 LRRC73Q5JTD7 316 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 APOOLQ6UXV4 268 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 FAM83HQ6ZRV2 1179 aaPredicted RBP9.93□□□□□ -0.82
CCDC171-208ENST00000486641 PXKQ7Z7A4 578 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 KLHDC8AQ8IYD2 350 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 OR6V1Q8N148 313 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 C17orf47Q8NEP4 570 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 GANCQ8TET4 914 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 BCL7CQ8WUZ0 217 aaPredicted RBP9.93□□□□□ -0.82
CCDC171-208ENST00000486641 OR5P2Q8WZ92 322 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 NSMAFQ92636 917 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF707Q96C28 371 aaPredicted RBP9.93□□□□□ -0.82
CCDC171-208ENST00000486641 OR1F2PQ96R84 312 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 SLC19A3Q9BZV2 496 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 DNTTIP1Q9H147 329 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 SIRT3Q9NTG7 399 aaPredicted RBP9.93□□□□□ -0.82
CCDC171-208ENST00000486641 NDRG3Q9UGV2 375 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 HMSDA8MTL9 139 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 CTDSPLO15194 276 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 PLPP2O43688 288 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 SPDEFO95238 335 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 APOC1P02654 83 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 NR2F1P10589 423 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 AHRP35869 848 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 ACVR1BP36896 505 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 BUD31P41223 144 aaPredicted RBP9.93□□□□□ -0.82
CCDC171-208ENST00000486641 OMPP47874 163 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 STXBP1P61764 594 aaKnown RBP9.93□□□□□ -0.82
CCDC171-208ENST00000486641 OC90Q02509 493 aaPredicted RBP9.93□□□□□ -0.82
CCDC171-208ENST00000486641 ACSM3Q53FZ2 586 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 PIP5KL1Q5T9C9 394 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF783Q6ZMS7 281 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 RNF180Q86T96 592 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 HDDC3Q8N4P3 179 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF740Q8NDX6 193 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 PXT1Q8NFP0 134 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 BPIFCQ8NFQ6 507 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 OR13C5Q8NGS8 318 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 PLD4Q96BZ4 506 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 LYSMD1Q96S90 227 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 SEMA4CQ9C0C4 833 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 AP5M1Q9H0R1 490 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 MED20Q9H944 212 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms