RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 YES1P07947 543 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 MSMBP08118 114 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 CTAGE8P0CG41 777 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 NCF1P14598 390 aaPredicted RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 DAOP14920 347 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 SHC1P29353 583 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 IL12BP29460 328 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 SERPINB1P30740 379 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 MAGEA3P43357 314 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 HSPA7P48741 367 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 KHKP50053 298 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 SNRPD2P62316 118 aaKnown RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 SARNPP82979 210 aaKnown RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 SRSF4Q08170 494 aaKnown RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 TGFBIQ15582 683 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 EXOSC6Q5RKV6 272 aaKnown RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 MED27Q6P2C8 311 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 KLHL17Q6TDP4 642 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 RHOUQ7L0Q8 258 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 SLC46A3Q7Z3Q1 461 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 C1QL2Q7Z5L3 287 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 GALNT7Q86SF2 657 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 ADAMTSL2Q86TH1 951 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 CNTN4Q8IWV2 1026 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 CTAGE4Q8IX94 777 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 GTPBP8Q8N3Z3 284 aaPredicted RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 UBL4BQ8N7F7 174 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 ZNF433Q8N7K0 673 aaPredicted RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 CEP112Q8N8E3 955 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 OR4N2Q8NGD1 307 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 OR52N5Q8NH56 324 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 HUS1BQ8NHY5 278 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 UHMK1Q8TAS1 419 aaKnown RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 DUSP19Q8WTR2 217 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 TAF15Q92804 592 aaKnown RBP eCLIP7.18□□□□□ -1.26
XRN1-212ENST00000486211 LRRC58Q96CX6 371 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 C1orf147Q96MC9 270 aaPredicted RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 VSTM2LQ96N03 204 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 LRRC37BQ96QE4 947 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 TMPRSS13Q9BYE2 586 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 SRXN1Q9BYN0 137 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 ANKRA2Q9H9E1 313 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 LPAR2Q9HBW0 351 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 G6PC2Q9NQR9 355 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 PRODH2Q9UF12 536 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 CES1P1Q9UKY3 287 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 ABCG2Q9UNQ0 655 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 EPPK1P58107 5090 aaKnown RBP7.17□□□□□ -1.26
XRN1-212ENST00000486211 CCT8L1PA6NM43 557 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 MIF4GDA9UHW6 222 aaKnown RBP7.17□□□□□ -1.26
XRN1-212ENST00000486211 PIN1P1O15428 100 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 STK16O75716 305 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 PDE5AO76074 875 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 BCL10O95999 233 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 PNPP00491 289 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 GBAP04062 536 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 PABPC4LP0CB38 370 aaKnown RBP7.17□□□□□ -1.26
XRN1-212ENST00000486211 MLNP12872 115 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 PRTN3P24158 256 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 PIK3CBP42338 1070 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 PPOXP50336 477 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 TERF1P54274 439 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 GPX6P59796 221 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 MRPS35P82673 323 aaKnown RBP7.17□□□□□ -1.26
XRN1-212ENST00000486211 CHRNEQ04844 493 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 DDX39BQ13838 428 aaKnown RBP7.17□□□□□ -1.26
XRN1-212ENST00000486211 LTB4RQ15722 352 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 ARL13AQ5H913 290 aaPredicted RBP7.17□□□□□ -1.26
XRN1-212ENST00000486211 DRICH1Q6PGQ1 229 aaPredicted RBP7.17□□□□□ -1.26
XRN1-212ENST00000486211 CYP20A1Q6UW02 462 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 FRA10AC1Q70Z53 315 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 PEX26Q7Z412 305 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 ZNF786Q8N393 782 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 NKAPQ8N5F7 415 aaKnown RBP7.17□□□□□ -1.26
XRN1-212ENST00000486211 SYT14Q8NB59 555 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 ANKRD49Q8WVL7 239 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 UBE2E3Q969T4 207 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 SIGLEC10Q96LC7 697 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 MTERF1Q99551 399 aaKnown RBP7.17□□□□□ -1.26
XRN1-212ENST00000486211 RACGAP1Q9H0H5 632 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 TSPY26PQ9H489 355 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 TMEM185BQ9H7F4 350 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 CXorf36Q9H7Y0 433 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 FKRPQ9H9S5 495 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 BCO1Q9HAY6 547 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 SDHAF3Q9NRP4 125 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 VDAC3Q9Y277 283 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 TRAF6Q9Y4K3 522 aa7.17□□□□□ -1.26
XRN1-212ENST00000486211 C7orf72A4D263 438 aa7.16□□□□□ -1.26
XRN1-212ENST00000486211 SHOX2O60902 331 aaPredicted RBP7.16□□□□□ -1.26
XRN1-212ENST00000486211 RAD51DO75771 328 aa7.16□□□□□ -1.26
XRN1-212ENST00000486211 PRKD3O94806 890 aa7.16□□□□□ -1.26
XRN1-212ENST00000486211 FSHBP01225 129 aa7.16□□□□□ -1.26
XRN1-212ENST00000486211 IGFBP1P08833 259 aaPredicted RBP7.16□□□□□ -1.26
XRN1-212ENST00000486211 MDKP21741 143 aaPredicted RBP7.16□□□□□ -1.26
XRN1-212ENST00000486211 KRT20P35900 424 aa7.16□□□□□ -1.26
XRN1-212ENST00000486211 FEN1P39748 380 aaKnown RBP7.16□□□□□ -1.26
XRN1-212ENST00000486211 IDH3GP51553 393 aaPredicted RBP7.16□□□□□ -1.26
XRN1-212ENST00000486211 CARD18P57730 90 aa7.16□□□□□ -1.26
XRN1-212ENST00000486211 MRPS22P82650 360 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms