RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 OR10A5Q9H207 317 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 LIN28AQ9H9Z2 209 aaKnown RBP15.6■□□□□ 0.09
VIM-205ENST00000485947 SH2D2AQ9NP31 389 aa15.6■□□□□ 0.09
VIM-205ENST00000485947 MYO7BQ6PIF6 2116 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 CSMD1Q96PZ7 3565 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 TCRBV5S2A0A599 114 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 ANKRD33BA6NCL7 494 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 OR14I1A6ND48 311 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 WISP2O76076 250 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 PDE9AO76083 593 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 GLSO94925 669 aaPredicted RBP15.59■□□□□ 0.09
VIM-205ENST00000485947 NKX2-2O95096 273 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 BCHEP06276 602 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 GPIP06744 558 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 TFPTP0C1Z6 253 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 FBXO45P0C2W1 286 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 ACP2P11117 423 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 SSTR4P31391 388 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 KDELR2P33947 212 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 TMED10P49755 219 aaKnown RBP15.59■□□□□ 0.09
VIM-205ENST00000485947 EMDP50402 254 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 CRISP3P54108 245 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 DUSP8Q13202 625 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 EBPQ15125 230 aaKnown RBP15.59■□□□□ 0.09
VIM-205ENST00000485947 TBCELQ5QJ74 424 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 PATL1Q86TB9 770 aaKnown RBP15.59■□□□□ 0.09
VIM-205ENST00000485947 ZNF615Q8N8J6 731 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 FAM57AQ8TBR7 257 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 SLC9A6Q92581 669 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 RAB8BQ92930 207 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 MAL2Q969L2 176 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 C16orf58Q96GQ5 468 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 TMEM19Q96HH6 336 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 SECISBP2Q96T21 854 aaKnown RBP15.59■□□□□ 0.09
VIM-205ENST00000485947 YIPF4Q9BSR8 244 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 WWTR1Q9GZV5 400 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 RASSF4Q9H2L5 321 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 DCLRE1BQ9H816 532 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 FOLH1BQ9HBA9 442 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 DEPPQ9NTK1 212 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 QPCTLQ9NXS2 382 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 RPS6KA6Q9UK32 745 aa15.59■□□□□ 0.09
VIM-205ENST00000485947 SAMD4AQ9UPU9 718 aaKnown RBP15.59■□□□□ 0.09
VIM-205ENST00000485947 C2orf92A0A1B0GVN3 265 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 HNRNPRO43390 633 aaKnown RBP15.58■□□□□ 0.08
VIM-205ENST00000485947 HS6ST1O60243 411 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 NADKO95544 446 aaPredicted RBP15.58■□□□□ 0.08
VIM-205ENST00000485947 IFNA14P01570 189 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 NR2F1P10589 423 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 RIPPLY3P57055 190 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 PCBP3P57721 371 aaKnown RBP15.58■□□□□ 0.08
VIM-205ENST00000485947 GPR85P60893 370 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 PPIAP62937 165 aaKnown RBP15.58■□□□□ 0.08
VIM-205ENST00000485947 PLGLB1Q02325 96 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 HLA-DQA1Q5Y7H0 255 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 TMEM211Q6ICI0 200 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 HEPHL1Q6MZM0 1159 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 LYPD8Q6UX82 237 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 DOLPP1Q86YN1 238 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 FAM109AQ8N4B1 249 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 ZNF441Q8N8Z8 693 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 SLC16A11Q8NCK7 471 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 SIMC1Q8NDZ2 872 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 CHDHQ8NE62 594 aaPredicted RBP15.58■□□□□ 0.08
VIM-205ENST00000485947 BBS10Q8TAM1 723 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 DOK4Q8TEW6 326 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 SLC38A5Q8WUX1 472 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 SLC35A4Q96G79 324 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 VSTM2LQ96N03 204 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 TRNT1Q96Q11 434 aaKnown RBP15.58■□□□□ 0.08
VIM-205ENST00000485947 BTBD2Q9BX70 525 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 TTTY12Q9BZ98 90 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 S100A14Q9HCY8 104 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 BCL2L10Q9HD36 194 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 DCAF13Q9NV06 445 aaKnown RBP15.58■□□□□ 0.08
VIM-205ENST00000485947 TINAGQ9UJW2 476 aa15.58■□□□□ 0.08
VIM-205ENST00000485947 A0A1B0GTH9 108 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 A0A1B0GVC2 190 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 HRKO00198 91 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 TP53I11O14683 189 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 SUSD5O60279 629 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 ATP6V1G2O95670 118 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 IGHG3P01860 377 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 CLPSP04118 112 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 NAGAP17050 411 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 POU3F2P20265 443 aaPredicted RBP15.57■□□□□ 0.08
VIM-205ENST00000485947 PSMA4P25789 261 aaKnown RBP15.57■□□□□ 0.08
VIM-205ENST00000485947 NRG3P56975 720 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 DCAF7P61962 342 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 PSPHP78330 225 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 RPP38P78345 283 aaKnown RBP15.57■□□□□ 0.08
VIM-205ENST00000485947 MRPS22P82650 360 aaKnown RBP15.57■□□□□ 0.08
VIM-205ENST00000485947 NTRK2Q16620 822 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 DUSP5Q16690 384 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 ARHGAP11BQ3KRB8 267 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 LRRC23Q53EV4 343 aaPredicted RBP15.57■□□□□ 0.08
VIM-205ENST00000485947 LRRC74BQ6ZQY2 392 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 CBLL1Q75N03 491 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 C16orf62Q7Z3J2 963 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 FBXO30Q8TB52 745 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms