RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 BCL2A1Q16548 175 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 TMEM44Q2T9K0 475 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 PAGE3Q5JUK9 113 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 COX20Q5RI15 118 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.13■□□□□ 0.17
SREBF1-213ENST00000485080 TYW3Q6IPR3 259 aaKnown RBP16.13■□□□□ 0.17
SREBF1-213ENST00000485080 AAGABQ6PD74 315 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 DNAJC14Q6Y2X3 702 aaPredicted RBP16.13■□□□□ 0.17
SREBF1-213ENST00000485080 FRRS1Q6ZNA5 592 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 LRRC74BQ6ZQY2 392 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 IFNEQ86WN2 208 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 OR14L1PQ8NHC6 308 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 ABTB1Q969K4 478 aaPredicted RBP16.13■□□□□ 0.17
SREBF1-213ENST00000485080 RAD21L1Q9H4I0 556 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 DKKL1Q9UK85 242 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 SLC6A5Q9Y345 797 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 WDR45Q9Y484 360 aa16.13■□□□□ 0.17
SREBF1-213ENST00000485080 CENPEQ02224 2701 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 UGT2B17O75795 530 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 CD1EP15812 388 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 PPIBP23284 216 aaKnown RBP16.12■□□□□ 0.17
SREBF1-213ENST00000485080 SUMO3P55854 103 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-213ENST00000485080 ADORA2A-AS1P86434 159 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 FADDQ13158 208 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 SF3B4Q15427 424 aaKnown RBP eCLIP16.12■□□□□ 0.172e-9■■■■□ 20.6
SREBF1-213ENST00000485080 GTDC1Q4AE62 458 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 ENPP6Q6UWR7 440 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 DLEU7Q6UYE1 221 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 MSRB3Q8IXL7 192 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 ULK2Q8IYT8 1036 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 ZNF619Q8N2I2 560 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 ZNF808Q8N4W9 903 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-213ENST00000485080 TOR1AIP2Q8NFQ8 470 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 OR5M9Q8NGP3 310 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 WDYHV1Q96HA8 205 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 SAR1AQ9NR31 198 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 SLC25A37Q9NYZ2 338 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 KCNE5Q9UJ90 142 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 SH3BGRL2Q9UJC5 107 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 LEF1Q9UJU2 399 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-213ENST00000485080 ADGRG4Q8IZF6 3080 aa16.12■□□□□ 0.17
SREBF1-213ENST00000485080 NBPF19A0A087WUL8 3843 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 SERINC4A6NH21 518 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 CLIC1O00299 241 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 SLC22A2O15244 555 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 EIF4E2O60573 245 aaKnown RBP16.11■□□□□ 0.17
SREBF1-213ENST00000485080 ZG16O60844 167 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 DNAJA2O60884 412 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 SNRPB2P08579 225 aaKnown RBP16.11■□□□□ 0.17
SREBF1-213ENST00000485080 TFPTP0C1Z6 253 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 ZNF17P17021 662 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 SMSP52788 366 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 MAPK11Q15759 364 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 RTL6Q6ICC9 239 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 XKRXQ6PP77 449 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 B4GALNT2Q8NHY0 566 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 PNPT1Q8TCS8 783 aaKnown RBP16.11■□□□□ 0.17
SREBF1-213ENST00000485080 PHOSPHO1Q8TCT1 267 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 C10orf82Q8WW14 230 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 ITLN2Q8WWU7 325 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-213ENST00000485080 ARSGQ96EG1 525 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 AURKBQ96GD4 344 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-213ENST00000485080 SFXN2Q96NB2 322 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 SLC38A1Q9H2H9 487 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 MTHFD2LQ9H903 347 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-213ENST00000485080 SLAMF8Q9P0V8 285 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 TNFRSF10DQ9UBN6 386 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 MKLN1Q9UL63 735 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 ICAM5Q9UMF0 924 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 NDUFAF1Q9Y375 327 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 FAM215AQ9Y5M1 114 aa16.11■□□□□ 0.17
SREBF1-213ENST00000485080 NPIPA5A0A0B4J1W7 369 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 NPIPA7E9PJI5 369 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 H6PDO95479 791 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 NPIPA8P0DM63 369 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 ETFAP13804 333 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 HK1P19367 917 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 LHX2P50458 406 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 DSTNP60981 165 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 HPCAP84074 193 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 CHRNEQ04844 493 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 GNA13Q14344 377 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 RGNQ15493 299 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 GPR68Q15743 365 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 SYPL1Q16563 259 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 COQ5Q5HYK3 327 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 DCST1Q5T197 706 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 PDZK1Q5T2W1 519 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 C1orf185Q5T7R7 199 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 PRAMEF8Q5VWM4 474 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 PRAMEF7Q5VXH5 474 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 ZNF585AQ6P3V2 769 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 B3GNT6Q6ZMB0 384 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 GTPBP8Q8N3Z3 284 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-213ENST00000485080 MARVELD2Q8N4S9 558 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 ANKFN1Q8N957 763 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 FAM71CQ8NEG0 241 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 ZPLD1Q8TCW7 415 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 ZBTB8AQ96BR9 441 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 UCN2Q96RP3 112 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms