RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 NCLNQ969V3 563 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 CHIAQ9BZP6 476 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 SLC25A51Q9H1U9 297 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 KAT8Q9H7Z6 458 aaKnown RBP2.89□□□□□ -1.95
CCDC66-219ENST00000484441 NANSQ9NR45 359 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 DCDC2Q9UHG0 476 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 SCML2Q9UQR0 700 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 PARD3Q8TEW0 1356 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 LOC100131303A0A0U1RQF7 123 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 TCP11X1B4DZS4 312 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 XRCC1P18887 633 aaPredicted RBP2.88□□□□□ -1.95
CCDC66-219ENST00000484441 HTR1EP28566 365 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 PRDX6P30041 224 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 NTSP30990 170 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 UGT1A5P35504 534 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 GCKP35557 465 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 IL1F10Q8WWZ1 152 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 CCDC43Q96MW1 224 aaKnown RBP2.88□□□□□ -1.95
CCDC66-219ENST00000484441 PPDPFQ9H3Y8 114 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 SH2D2AQ9NP31 389 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 ASTN1O14525 1302 aa2.88□□□□□ -1.95
CCDC66-219ENST00000484441 ZNF705EA8MWA4 302 aaPredicted RBP2.87□□□□□ -1.95
CCDC66-219ENST00000484441 K7N7A8 449 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 CASKO14936 926 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 SNAI2O43623 268 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 NPIPB7O75200 414 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 RALAP11233 206 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 CD1BP29016 333 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 AQP1P29972 269 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 PDIA5Q14554 519 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 LCA5Q86VQ0 697 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 H1FOOQ8IZA3 346 aaPredicted RBP2.87□□□□□ -1.95
CCDC66-219ENST00000484441 MINDY2Q8NBR6 621 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 ANKRD20A12PQ8NF67 263 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 OR2T33Q8NG76 320 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 NEIL3Q8TAT5 605 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 BLOC1S5Q8TDH9 187 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 ELMO2Q96JJ3 720 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 MCHR1Q99705 422 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 ATG10Q9H0Y0 220 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 PATZ1Q9HBE1 687 aaKnown RBP2.87□□□□□ -1.95
CCDC66-219ENST00000484441 CNOT2Q9NZN8 540 aaKnown RBP2.87□□□□□ -1.95
CCDC66-219ENST00000484441 CYTH4Q9UIA0 394 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 STRAPQ9Y3F4 350 aaKnown RBP2.87□□□□□ -1.95
CCDC66-219ENST00000484441 WSB1Q9Y6I7 421 aa2.87□□□□□ -1.95
CCDC66-219ENST00000484441 THSD7BQ9C0I4 1608 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 DDX39AO00148 427 aaKnown RBP2.86□□□□□ -1.95
CCDC66-219ENST00000484441 AKR7A3O95154 331 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 THRBP10828 461 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 TSPAN8P19075 237 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 NUDT1P36639 197 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 ZNF691Q5VV52 312 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 CYS1Q717R9 158 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 ZSCAN4Q8NAM6 433 aaPredicted RBP2.86□□□□□ -1.95
CCDC66-219ENST00000484441 TRUB1Q8WWH5 349 aaKnown RBP2.86□□□□□ -1.95
CCDC66-219ENST00000484441 TMEM186Q96B77 213 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 UPRTQ96BW1 309 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 MBOAT4Q96T53 435 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 RNF126Q9BV68 326 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 SRXN1Q9BYN0 137 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 NMNAT2Q9BZQ4 307 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 POLR3FQ9H1D9 316 aaPredicted RBP2.86□□□□□ -1.95
CCDC66-219ENST00000484441 RPAP3Q9H6T3 665 aaPredicted RBP2.86□□□□□ -1.95
CCDC66-219ENST00000484441 SYTL2Q9HCH5 934 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 CYTL1Q9NRR1 136 aa2.86□□□□□ -1.95
CCDC66-219ENST00000484441 UBQLN1Q9UMX0 589 aaKnown RBP2.86□□□□□ -1.95
CCDC66-219ENST00000484441 ARHGAP42A6NI28 874 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 KERAO60938 352 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 IGHV4-34P06331 123 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 PDHBP11177 359 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 GNPDA1P46926 289 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 NOVA1P51513 510 aaKnown RBP2.85□□□□□ -1.95
CCDC66-219ENST00000484441 OR8G2PQ6IF36 304 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 WDR74Q6RFH5 385 aaPredicted RBP2.85□□□□□ -1.95
CCDC66-219ENST00000484441 WDR88Q6ZMY6 472 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 ARMCX2Q7L311 632 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 ZNF786Q8N393 782 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 TMEM252Q8N6L7 170 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 RNF148Q8N7C7 305 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 ARIH2OSQ8N7S6 290 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 OR1E3Q8WZA6 343 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 RDH5Q92781 318 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 STARD4Q96DR4 205 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 ARHGDIGQ99819 225 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 CITED1Q99966 193 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 SCRT1Q9BWW7 348 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 NFKBIZQ9BYH8 718 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 ALDH8A1Q9H2A2 487 aaPredicted RBP2.85□□□□□ -1.95
CCDC66-219ENST00000484441 TMEM231Q9H6L2 316 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 C1orf123Q9NWV4 160 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 MTRRQ9UBK8 725 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 CRLS1Q9UJA2 301 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 IFT52Q9Y366 437 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 MAB21L2Q9Y586 359 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 CACNG2Q9Y698 323 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 CCDC7Q96M83 1385 aa2.85□□□□□ -1.95
CCDC66-219ENST00000484441 TRBV6-6A0A0A6YYG2 114 aa2.84□□□□□ -1.95
CCDC66-219ENST00000484441 CFAP73A6NFT4 308 aa2.84□□□□□ -1.95
CCDC66-219ENST00000484441 LRRC30A6NM36 301 aa2.84□□□□□ -1.95
CCDC66-219ENST00000484441 WASHC1A8K0Z3 465 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms