RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 HNRNPCL2B2RXH8 293 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 HNRNPCL3B7ZW38 293 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 NPIPB9F8W1W9 429 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 CXCR6O00574 342 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 CDC40O60508 579 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDAC1-208ENST00000482310 HNRNPCL1O60812 293 aaKnown RBP12.08□□□□□ -0.48
HDAC1-208ENST00000482310 BCAS1O75363 584 aaPredicted RBP12.08□□□□□ -0.48
HDAC1-208ENST00000482310 NUDT14O95848 222 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 UBTFL6P0CB48 400 aaPredicted RBP12.08□□□□□ -0.48
HDAC1-208ENST00000482310 HNRNPCL4P0DMR1 293 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 UBL4AP11441 157 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 IL7RP16871 459 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 GDF1P27539 372 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 GAS1P54826 345 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 RBBP4Q09028 425 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 CEACAM7Q14002 265 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 ZNF311Q5JNZ3 666 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 SAMD4BQ5PRF9 694 aaKnown RBP12.08□□□□□ -0.48
HDAC1-208ENST00000482310 TBCELQ5QJ74 424 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 SLC30A6Q6NXT4 461 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 ERICH5Q6P6B1 374 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 KRT73Q86Y46 540 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 CISD2Q8N5K1 135 aaKnown RBP12.08□□□□□ -0.48
HDAC1-208ENST00000482310 OR4K17Q8NGC6 315 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 OR10Q1Q8NGQ4 319 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 OR1J4Q8NGS1 313 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 FAM162AQ96A26 154 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 GNRHR2Q96P88 292 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 SECISBP2Q96T21 854 aaKnown RBP12.08□□□□□ -0.48
HDAC1-208ENST00000482310 BTBD10Q9BSF8 475 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 TTTY12Q9BZ98 90 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 SAP130Q9H0E3 1048 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 DSN1Q9H410 356 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 MTHFD2LQ9H903 347 aaPredicted RBP12.08□□□□□ -0.48
HDAC1-208ENST00000482310 SEC14L3Q9UDX4 400 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 BOKQ9UMX3 212 aaPredicted RBP12.08□□□□□ -0.48
HDAC1-208ENST00000482310 AP3M1Q9Y2T2 418 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 V9GYQ6 96 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 ZGRF1Q86YA3 2104 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 DSPPQ9NZW4 1301 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 KIAA1549Q9HCM3 1950 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 AGAP5A6NIR3 686 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 LRRC3CA6NJW4 275 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 ALG1L2C9J202 215 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 H3BNH8 94 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 TFECO14948 347 aaPredicted RBP12.07□□□□□ -0.48
HDAC1-208ENST00000482310 FRS3O43559 492 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 HCRTR2O43614 444 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 DNAJA2O60884 412 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 TRAPPC6AO75865 159 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 CSTAP01040 98 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 DBIP07108 87 aaKnown RBP12.07□□□□□ -0.48
HDAC1-208ENST00000482310 RFPL3SP0C7P2 107 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 PABPC4LP0CB38 370 aaKnown RBP12.07□□□□□ -0.48
HDAC1-208ENST00000482310 LCN1P31025 176 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 NCALDP61601 193 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 PPIAP62937 165 aaKnown RBP12.07□□□□□ -0.48
HDAC1-208ENST00000482310 ZNF117Q03924 483 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 DMTNQ08495 405 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 FGFBP1Q14512 234 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 ZNF141Q15928 474 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 GLIPR1L2Q4G1C9 344 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 DNAL1Q4LDG9 190 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 LIN52Q52LA3 116 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 KLHL26Q53HC5 615 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 RNFT1Q5M7Z0 435 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 MRPL2Q5T653 305 aaKnown RBP12.07□□□□□ -0.48
HDAC1-208ENST00000482310 INTS11Q5TA45 600 aaKnown RBP12.07□□□□□ -0.48
HDAC1-208ENST00000482310 FAM180AQ6UWF9 173 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 ARMC8Q8IUR7 673 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 CNOT9Q92600 299 aaKnown RBP12.07□□□□□ -0.48
HDAC1-208ENST00000482310 MCUR1Q96AQ8 359 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 TAMM41Q96BW9 452 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 FRMD6Q96NE9 622 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 TAAR6Q96RI8 345 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 ZNF607Q96SK3 696 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 KLHDC3Q9BQ90 382 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 PCDHAC1Q9H158 963 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.07□□□□□ -0.48
HDAC1-208ENST00000482310 RLIMQ9NVW2 624 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 DKKL1Q9UK85 242 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 FBXL2Q9UKC9 423 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 GPC6Q9Y625 555 aaPredicted RBP12.07□□□□□ -0.48
HDAC1-208ENST00000482310 GTF3C1Q12789 2109 aa12.07□□□□□ -0.48
HDAC1-208ENST00000482310 ERICH4A6NGS2 130 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 TTLL8A6PVC2 850 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 B4DXG7 233 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 M0QX08 132 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 CDK2AP1O14519 115 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 ADAM10O14672 748 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 SNPHO15079 494 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 TPST1O60507 370 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 TRIM3O75382 744 aaPredicted RBP12.06□□□□□ -0.48
HDAC1-208ENST00000482310 GMNNO75496 209 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 GCM2O75603 506 aaPredicted RBP12.06□□□□□ -0.48
HDAC1-208ENST00000482310 DNAJC8O75937 253 aaPredicted RBP12.06□□□□□ -0.48
HDAC1-208ENST00000482310 ATP5HO75947 161 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 PDE9AO76083 593 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 SNX4O95219 450 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms