RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 BTLAQ7Z6A9 289 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 ANKRD46Q86W74 232 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 METTL25Q8N6Q8 603 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 OR56A1Q8NGH5 318 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 RFWD2Q8NHY2 731 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 FAM110BQ8TC76 370 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 PHOSPHO1Q8TCT1 267 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 ADAMTS15Q8TE58 950 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 OR5P2Q8WZ92 322 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 STARD4Q96DR4 205 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 STACQ99469 402 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 SORT1Q99523 831 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 DUSP26Q9BV47 211 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 ACTRT3Q9BYD9 372 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 NUF2Q9BZD4 464 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 PIGMQ9H3S5 423 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 NEUROD4Q9HD90 331 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 KCNK9Q9NPC2 374 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 UBQLN4Q9NRR5 601 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 GPATCH2Q9NW75 528 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 NOP53Q9NZM5 478 aaKnown RBP9.42□□□□□ -0.9
CPSF4-212ENST00000482251 FAF1Q9UNN5 650 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-212ENST00000482251 MPDZO75970 2070 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 RNF103-CHMP3A0A140T963 221 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 FAM221AA4D161 298 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 A8MXE2 369 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 C9JVG2 144 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 TNFRSF21O75509 655 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 NGFRP08138 427 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 ZNF17P17021 662 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 IL11P20809 199 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 SHC1P29353 583 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 SFTPDP35247 375 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 KIR2DL2P43627 348 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-212ENST00000482251 KCNJ5P48544 419 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 SLC1A6P48664 564 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 CCR4P51679 360 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 NME5P56597 212 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 EEFSECP57772 596 aaKnown RBP9.41□□□□□ -0.9
CPSF4-212ENST00000482251 RPS3AP61247 264 aaKnown RBP9.41□□□□□ -0.9
CPSF4-212ENST00000482251 MPP2Q14168 576 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 EXOC3L2Q2M3D2 409 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 TMEM44Q2T9K0 475 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.41□□□□□ -0.9
CPSF4-212ENST00000482251 OR2A2Q6IF42 318 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 ZCCHC12Q6PEW1 402 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 SPNS3Q6ZMD2 512 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 ZNF550Q7Z398 422 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 LSRQ86X29 649 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-212ENST00000482251 WDR75Q8IWA0 830 aaKnown RBP9.41□□□□□ -0.9
CPSF4-212ENST00000482251 RIMKLAQ8IXN7 391 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 TMCO5AQ8N6Q1 288 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 OR4A15Q8NGL6 344 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 OR10D3Q8NH80 312 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 B4GALNT2Q8NHY0 566 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 POC1BQ8TC44 478 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 SFXN5Q8TD22 340 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 MGARPQ8TDB4 240 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 COQ8BQ96D53 544 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 PGM2Q96G03 612 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 OR7D2Q96RA2 312 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 PRPF18Q99633 342 aaKnown RBP9.41□□□□□ -0.9
CPSF4-212ENST00000482251 PRRG4Q9BZD6 226 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 BHLHE41Q9C0J9 482 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-212ENST00000482251 PIGUQ9H490 435 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 SERHL2Q9H4I8 314 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 AKTIPQ9H8T0 292 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 RNF122Q9H9V4 155 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 DUSP22Q9NRW4 184 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 KLHL28Q9NXS3 571 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 C6orf203Q9P0P8 240 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-212ENST00000482251 CARD8Q9Y2G2 431 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 ZNF175Q9Y473 711 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 AP4B1Q9Y6B7 739 aa9.41□□□□□ -0.9
CPSF4-212ENST00000482251 CENPVL1A0A0U1RR11 272 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 A0A1W2PPR1 153 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 LINC01387J3KSC0 135 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 MSTNO14793 375 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 TM9SF1O15321 606 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 BIRC5O15392 142 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 CXCL13O43927 109 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 PLGP00747 810 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-212ENST00000482251 MYZAPP0CAP1 466 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 DHRS4L1P0CG22 281 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 FCGR2AP12318 317 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 POU2F1P14859 743 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 CD1EP15812 388 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 DNASE1P24855 282 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 CLDN8P56748 225 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 EMX2Q04743 252 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 MAD2L1Q13257 205 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-212ENST00000482251 DAZAP2Q15038 168 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-212ENST00000482251 TOMM34Q15785 309 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-212ENST00000482251 CTU2Q2VPK5 515 aaKnown RBP9.4□□□□□ -0.9
CPSF4-212ENST00000482251 LSM12Q3MHD2 195 aaKnown RBP9.4□□□□□ -0.9
CPSF4-212ENST00000482251 GLYR1Q49A26 553 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-212ENST00000482251 ZNF474Q6S9Z5 364 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-212ENST00000482251 CBLN3Q6UW01 205 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 PAMR1Q6UXH9 720 aa9.4□□□□□ -0.9
CPSF4-212ENST00000482251 HMGN2P46Q86SG4 172 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms