RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SYTL3Q4VX76 610 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 MTX3Q5HYI7 312 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 TCHHL1Q5QJ38 904 aaPredicted RBP3.72□□□□□ -1.81
VPS41-212ENST00000482217 LY6G6FQ5SQ64 297 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 DUPD1Q68J44 220 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 CES5AQ6NT32 575 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 VITQ6UXI7 678 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 CDHR3Q6ZTQ4 885 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 CCDC121Q6ZUS5 278 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 TMPRSS11FQ6ZWK6 438 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 CENPUQ71F23 418 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 GPR141Q7Z602 305 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 S100A7AQ86SG5 101 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ERICH1Q86X53 443 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 PTOV1Q86YD1 416 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 GID4Q8IVV7 300 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ADHFE1Q8IWW8 467 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ZNF100Q8IYN0 542 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 GPC2Q8N158 579 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 PELI3Q8N2H9 469 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 PARP16Q8N5Y8 322 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 SLC5A8Q8N695 610 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 BEST2Q8NFU1 509 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 OR7G2Q8NG99 324 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 OR10Z1Q8NGY1 313 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 C16orf52Q8NHV5 167 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 TCP10LQ8TDR4 215 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 CA5BP1Q8WTZ4 195 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 PIH1D2Q8WWB5 315 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 DNAJB3Q8WWF6 145 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ASB5Q8WWX0 329 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 SMPDL3AQ92484 453 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 EME1Q96AY2 570 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 BIRC7Q96CA5 298 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ECHDC3Q96DC8 303 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 MTBPQ96DY7 904 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 FBXO17Q96EF6 278 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ZNF419Q96HQ0 510 aaPredicted RBP3.72□□□□□ -1.81
VPS41-212ENST00000482217 RNF145Q96MT1 663 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 SLC38A2Q96QD8 506 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 TNFRSF13CQ96RJ3 184 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 APOL2Q9BQE5 337 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 TMEM79Q9BSE2 394 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 DPH7Q9BTV6 452 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 FUCA2Q9BTY2 467 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 CALN1Q9BXU9 219 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 BEX2Q9BXY8 128 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 PANK2Q9BZ23 570 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 PPP1R3EQ9H7J1 279 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 INIPQ9NRY2 104 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 PLCXD1Q9NUJ7 323 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ACOXLQ9NUZ1 547 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 NECAP2Q9NVZ3 263 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 SLC9A2Q9UBY0 812 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 OR14J1Q9UGF5 321 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ENOPH1Q9UHY7 261 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ANAPC7Q9UJX3 599 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 MYO6Q9UM54 1294 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 GINS2Q9Y248 185 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ERGIC3Q9Y282 383 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 GSTK1Q9Y2Q3 226 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.72□□□□□ -1.81
VPS41-212ENST00000482217 WIF1Q9Y5W5 379 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ROCK2O75116 1388 aaKnown RBP3.72□□□□□ -1.81
VPS41-212ENST00000482217 GAGE12JA6NER3 117 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 DDTLA6NHG4 134 aaPredicted RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 TMEM114B3SHH9 223 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 ZNF814B7Z6K7 855 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 E5RI56 91 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 CHUKO15111 745 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 CLOCKO15516 846 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 HSPA12AO43301 675 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 XRCC2O43543 280 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 HUS1O60921 280 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SC5DO75845 299 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 OAZ2O95190 189 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 VAPBO95292 243 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SNAPINO95295 136 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 IGHV2-70P01814 119 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SFTPBP07988 381 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 RPS17P08708 135 aaKnown RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 OCMP0CE72 109 aaPredicted RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 SLC35E2BP0CK96 405 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SLC35E2P0CK97 266 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SAGP10523 405 aaPredicted RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 ENO3P13929 434 aaPredicted RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 PRF1P14222 555 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 CBR1P16152 277 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 ITGA2P17301 1181 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SRD5A2P31213 254 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 MAS1LP35410 378 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 ACVR1BP36896 505 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 NUMBP49757 651 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 METAP2P50579 478 aaKnown RBP eCLIP3.71□□□□□ -1.82
VPS41-212ENST00000482217 NR0B1P51843 470 aaKnown RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 ACLYP53396 1101 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SNRPEP62304 92 aaKnown RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 CHRNB3Q05901 458 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SCRN3Q0VDG4 424 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 CRMP1Q14194 572 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms