RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 AIFM2Q9BRQ8 373 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 NDUFAF3Q9BU61 184 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 GAL3ST2Q9H3Q3 398 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 ST6GALNAC2Q9UJ37 374 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 TTC7AQ9ULT0 858 aaPredicted RBP2.94□□□□□ -1.94
SMC6-208ENST00000481708 ERVK-19Q9WJR5 959 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 VPS13AQ96RL7 3174 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 GSTTP1A0A1W2PQM5 241 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 BCKDKO14874 412 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 SPINT2O43291 252 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 STK17BO94768 372 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 OXTP01178 125 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 MBP02144 154 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 SLC9A3P48764 834 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 GPX6P59796 221 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 HOXA4Q00056 320 aaPredicted RBP2.94□□□□□ -1.94
SMC6-208ENST00000481708 CSTF1Q05048 431 aaKnown RBP2.94□□□□□ -1.94
SMC6-208ENST00000481708 MIDNQ504T8 468 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 PAPD7Q5XG87 772 aaKnown RBP2.94□□□□□ -1.94
SMC6-208ENST00000481708 PLCXD3Q63HM9 321 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 GRASPQ7Z6J2 395 aaPredicted RBP2.94□□□□□ -1.94
SMC6-208ENST00000481708 M1APQ8TC57 530 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 CD101Q93033 1021 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 MCUR1Q96AQ8 359 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 TGM7Q96PF1 710 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 CSF3RQ99062 836 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 UQCC2Q9BRT2 126 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 UGT1A10Q9HAW8 530 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 MCCC2Q9HCC0 563 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 KLHL28Q9NXS3 571 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 C11orf21Q9P2W6 132 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 NOX1Q9Y5S8 564 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 RNF215Q9Y6U7 377 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 NCANO14594 1321 aa2.94□□□□□ -1.94
SMC6-208ENST00000481708 PTPRZ1P23471 2315 aaPredicted RBP2.94□□□□□ -1.94
SMC6-208ENST00000481708 ECDO95905 644 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 CLPTM1O96005 669 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 F10P00742 488 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CHRNB1P11230 501 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 XRCC1P18887 633 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 CSRP1P21291 193 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 VAMP7P51809 220 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 GEMP55040 296 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 MAZP56270 477 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 FCHO2Q0JRZ9 810 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 TRAF1Q13077 416 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SELENBP1Q13228 472 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ETFDHQ16134 617 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 BCL2A1Q16548 175 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 RBBP7Q16576 425 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 TTC27Q6P3X3 843 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ERICH5Q6P6B1 374 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SHC4Q6S5L8 630 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CDHR3Q6ZTQ4 885 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 EIF3MQ7L2H7 374 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 GBGT1Q8N5D6 347 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 RNF10Q8N5U6 811 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 C1orf52Q8N6N3 182 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 CHDHQ8NE62 594 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 OR10H4Q8NGA5 316 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CDC26Q8NHZ8 85 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 GPR148Q8TDV2 347 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 MAIP1Q8WWC4 291 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CERS2Q96G23 380 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 RIT2Q99578 217 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 UBAC1Q9BSL1 405 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 MFFQ9GZY8 342 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 OPN3Q9H1Y3 402 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 PARD6AQ9NPB6 346 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 MS4A12Q9NXJ0 267 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 FLRT3Q9NZU0 649 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 BDP1A6H8Y1 2624 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 LOC105371242A0A075B767 164 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 GAPDHSO14556 408 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 WNT9BO14905 357 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SH3BGRLO75368 114 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CA1P00915 261 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 RAF1P04049 648 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 UMODP07911 640 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 AMD1P17707 334 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 BRCC3P46736 316 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 CEBPDP49716 269 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 P2RX3P56373 397 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 PAX5Q02548 391 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 LGALS3BPQ08380 585 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ISXQ2M1V0 245 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 PLPP4Q5VZY2 271 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ANO5Q75V66 913 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 SHFQ7M4L6 423 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 WDR53Q7Z5U6 358 aaPredicted RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 LINC00523Q86TU6 105 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 LRRC75AQ8NAA5 344 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 ZNF248Q8NDW4 579 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 IL17DQ8TAD2 202 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 PDCD6IPQ8WUM4 868 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 VOPP1Q96AW1 172 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 BPIFA2Q96DR5 249 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 THOC1Q96FV9 657 aaKnown RBP2.93□□□□□ -1.94
SMC6-208ENST00000481708 ERGIC2Q96RQ1 377 aa2.93□□□□□ -1.94
SMC6-208ENST00000481708 PELOQ9BRX2 385 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms