RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 OR2T5Q6IEZ7 315 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 TMEM156Q8N614 296 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 OR2T29Q8NH02 315 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 PHOSPHO1Q8TCT1 267 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 PRR14Q9BWN1 585 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 TBL1XR1Q9BZK7 514 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 NTN4Q9HB63 628 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 RYDENQ9NUL5 291 aaKnown RBP16.12■□□□□ 0.17
UPF3A-206ENST00000480362 DNAJB12Q9NXW2 375 aaKnown RBP16.12■□□□□ 0.17
UPF3A-206ENST00000480362 POLHQ9Y253 713 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 H3BNH8 94 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 GTPBP1O00178 669 aaKnown RBP16.11■□□□□ 0.17
UPF3A-206ENST00000480362 AP3D1O14617 1153 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 CASQ2O14958 399 aaPredicted RBP16.11■□□□□ 0.17
UPF3A-206ENST00000480362 NDUFB5O43674 189 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 SCO2O43819 266 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 TPST2O60704 377 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 SEMA7AO75326 666 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 CYP7B1O75881 506 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 DNAJB5O75953 348 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 PRSS23O95084 383 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 ADRB1P08588 477 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 PRG2P13727 222 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 EVI2BP34910 448 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 ZNF136P52737 540 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 TRIP10Q15642 601 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 NDUFAF6Q330K2 333 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 LPCAT4Q643R3 524 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 CYP4Z1Q86W10 505 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 ICA1LQ8NDH6 482 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 OR10G3Q8NGC4 313 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 GRHL3Q8TE85 626 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 NRG4Q8WWG1 115 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 MCHR1Q99705 422 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 PIP5K1AQ99755 562 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 RTN4RQ9BZR6 473 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 STMN3Q9NZ72 180 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 TESMINQ9Y4I5 508 aa16.11■□□□□ 0.17
UPF3A-206ENST00000480362 EXPH5Q8NEV8 1989 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 TP53I11O14683 189 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 FFAR1O14842 300 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 DPM1O60762 260 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 ANGPTL1O95841 491 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 UBTFL6P0CB48 400 aaPredicted RBP16.1■□□□□ 0.17
UPF3A-206ENST00000480362 UBL4AP11441 157 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 RRM2P31350 389 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 IST1P53990 364 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 PPP1R8Q12972 351 aaKnown RBP16.1■□□□□ 0.17
UPF3A-206ENST00000480362 PIN1Q13526 163 aaPredicted RBP16.1■□□□□ 0.17
UPF3A-206ENST00000480362 ZNF468Q5VIY5 522 aaPredicted RBP16.1■□□□□ 0.17
UPF3A-206ENST00000480362 ZNF550Q7Z398 422 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 RANBP3LQ86VV4 465 aaPredicted RBP16.1■□□□□ 0.17
UPF3A-206ENST00000480362 DND1Q8IYX4 353 aaKnown RBP16.1■□□□□ 0.17
UPF3A-206ENST00000480362 BEST3Q8N1M1 668 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 GALNT16Q8N428 558 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 PHF10Q8WUB8 498 aaKnown RBP16.1■□□□□ 0.17
UPF3A-206ENST00000480362 SLC35B4Q969S0 331 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 ING2Q9H160 280 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 CCDC86Q9H6F5 360 aaKnown RBP16.1■□□□□ 0.17
UPF3A-206ENST00000480362 CTPS2Q9NRF8 586 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 HPF1Q9NWY4 346 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 VNN3Q9NY84 501 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 RHCGQ9UBD6 479 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 DKK4Q9UBT3 224 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 TEKT2Q9UIF3 430 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 A4GNTQ9UNA3 340 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 CARD8Q9Y2G2 431 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 NTNG1Q9Y2I2 539 aa16.1■□□□□ 0.17
UPF3A-206ENST00000480362 SAC3D1A6NKF1 404 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 A6NL46 340 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 CPSF4LA6NMK7 179 aaKnown RBP16.09■□□□□ 0.17
UPF3A-206ENST00000480362 ADAMDEC1O15204 470 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 ZNF264O43296 627 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 OIP5O43482 229 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 ENDOUP21128 410 aaKnown RBP16.09■□□□□ 0.17
UPF3A-206ENST00000480362 GCKP35557 465 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 ACAA2P42765 397 aaKnown RBP16.09■□□□□ 0.17
UPF3A-206ENST00000480362 PTDSS1P48651 473 aaKnown RBP16.09■□□□□ 0.17
UPF3A-206ENST00000480362 SOX8P57073 446 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 SPIBQ01892 262 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 GANABQ14697 944 aaKnown RBP16.09■□□□□ 0.17
UPF3A-206ENST00000480362 LRRC36Q1X8D7 754 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 DEFB109BQ30KR1 87 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 ENTPD8Q5MY95 495 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 ABHD17BQ5VST6 288 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 TMEM179BQ7Z7N9 219 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 ZNF605Q86T29 641 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 TSPYL5Q86VY4 417 aaPredicted RBP16.09■□□□□ 0.17
UPF3A-206ENST00000480362 ZNF440Q8IYI8 595 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 FAM71CQ8NEG0 241 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 RNF138Q8WVD3 245 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 ARSGQ96EG1 525 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 PRRC1Q96M27 445 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 LAT2Q9GZY6 243 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 REEP1Q9H902 201 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 ACAD8Q9UKU7 415 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 CHCHD2Q9Y6H1 151 aaPredicted RBP16.09■□□□□ 0.17
UPF3A-206ENST00000480362 U3KQV3 271 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 NINQ8N4C6 2090 aa16.09■□□□□ 0.17
UPF3A-206ENST00000480362 C2orf72A6NCS6 295 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms