RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 INTS11Q5TA45 600 aaKnown RBP8.13□□□□□ -1.11
DDX56-211ENST00000479602 SLC22A10Q63ZE4 541 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 SPNS3Q6ZMD2 512 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 FRRS1Q6ZNA5 592 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 GDF7Q7Z4P5 450 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 GALNTL5Q7Z4T8 443 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.13□□□□□ -1.11
DDX56-211ENST00000479602 YTHDF3Q7Z739 585 aaKnown RBP8.13□□□□□ -1.11
DDX56-211ENST00000479602 ZNF619Q8N2I2 560 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 FAM98AQ8NCA5 519 aaKnown RBP8.13□□□□□ -1.11
DDX56-211ENST00000479602 C11orf65Q8NCR3 313 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 BBS10Q8TAM1 723 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 GPR151Q8TDV0 419 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 RASSF5Q8WWW0 418 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 TMBIM1Q969X1 311 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 RCN3Q96D15 328 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 RNF145Q96MT1 663 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 VKORC1Q9BQB6 163 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 FAM173AQ9BQD7 235 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 SLC38A1Q9H2H9 487 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 OR51I1Q9H343 314 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 UBQLN3Q9H347 655 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 MUC13Q9H3R2 512 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 IKZF5Q9H5V7 419 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 ZDHHC11Q9H8X9 412 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 MTHFD2LQ9H903 347 aaPredicted RBP8.13□□□□□ -1.11
DDX56-211ENST00000479602 PROK2Q9HC23 129 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 ANKRD10Q9NXR5 420 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 SLAMF8Q9P0V8 285 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 TMEM181Q9P2C4 612 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 PRPF19Q9UMS4 504 aaKnown RBP8.13□□□□□ -1.11
DDX56-211ENST00000479602 OR10H1Q9Y4A9 318 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 ABCA4P78363 2273 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 INTS1Q8N201 2190 aaKnown RBP8.12□□□□□ -1.11
DDX56-211ENST00000479602 MYOCOSA0A1B0GUC4 107 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 PRAMEF27A3QJZ7 478 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 PRAMEF25A6NGN4 478 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 NPIPA5E9PKD4 350 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 KLRC4-KLRK1H3BQV0 150 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 SYT5O00445 386 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 SNPHO15079 494 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 ZNHIT1O43257 154 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 PDE9AO76083 593 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 IGHG3P01860 377 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 C8BP07358 591 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 T-ENOLP0DO92 83 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 CD1EP15812 388 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 CNR1P21554 472 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 IL12BP29460 328 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 ST13P50502 369 aaKnown RBP8.12□□□□□ -1.11
DDX56-211ENST00000479602 MAP2K6P52564 334 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 SMSP52788 366 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 HPCAP84074 193 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 ALDH6A1Q02252 535 aaKnown RBP8.12□□□□□ -1.11
DDX56-211ENST00000479602 TFF3Q07654 80 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 BNIP1Q12981 228 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 GLYR1Q49A26 553 aaPredicted RBP8.12□□□□□ -1.11
DDX56-211ENST00000479602 GTDC1Q4AE62 458 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 KLHL26Q53HC5 615 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 EMC4Q5J8M3 183 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 GCNT6Q5T4J0 391 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 TYW3Q6IPR3 259 aaKnown RBP8.12□□□□□ -1.11
DDX56-211ENST00000479602 REEP3Q6NUK4 255 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 C16orf89Q6UX73 402 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 C16orf62Q7Z3J2 963 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 PTOV1Q86YD1 416 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 SLC15A3Q8IY34 581 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 MARVELD2Q8N4S9 558 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 FADS6Q8N9I5 356 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 HIPK4Q8NE63 616 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 TNIP2Q8NFZ5 429 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 OR5AK3PQ8NH89 298 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 SLC38A5Q8WUX1 472 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 SLC9A6Q92581 669 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 CDS1Q92903 461 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 ARSGQ96EG1 525 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 C16orf58Q96GQ5 468 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 NSL1Q96IY1 281 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 OSBPL11Q9BXB4 747 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 MMADHCQ9H3L0 296 aaPredicted RBP8.12□□□□□ -1.11
DDX56-211ENST00000479602 ANKRA2Q9H9E1 313 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 SDHAF3Q9NRP4 125 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 BOKQ9UMX3 212 aaPredicted RBP8.12□□□□□ -1.11
DDX56-211ENST00000479602 NPIPA1Q9UND3 350 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 SLC35A3Q9Y2D2 325 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 IFT52Q9Y366 437 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 WDR45Q9Y484 360 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 WIF1Q9Y5W5 379 aa8.12□□□□□ -1.11
DDX56-211ENST00000479602 GPC6Q9Y625 555 aaPredicted RBP8.12□□□□□ -1.11
DDX56-211ENST00000479602 A0A087WZY1 265 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 LOC100653049A0A140TA62 436 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 A0A1B0GVC2 190 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 PRORSD1PA6NEY8 169 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 LRRC3CA6NJW4 275 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 CCT8L1PA6NM43 557 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 EIF4E2O60573 245 aaKnown RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 FZD7O75084 574 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 KRT34O76011 436 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 OXSR1O95747 527 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms