RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 CALML5Q9NZT1 146 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.6■□□□□ 0.57
VARS-224ENST00000479051 CORO2BQ9UQ03 480 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 RPH3AQ9Y2J0 694 aaPredicted RBP18.6■□□□□ 0.57
VARS-224ENST00000479051 FREM3P0C091 2139 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 RELNP78509 3460 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 A0A087WZY1 265 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 WIPF3A6NGB9 483 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 C17orf51A8MQB3 221 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 LINC01387J3KSC0 135 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 GMFGO60234 142 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 H6PDO95479 791 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 TCEA1P23193 301 aaKnown RBP18.59■□□□□ 0.57
VARS-224ENST00000479051 CHMP24386 653 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 ADSLP30566 484 aaPredicted RBP18.59■□□□□ 0.57
VARS-224ENST00000479051 SUMO3P55854 103 aaPredicted RBP18.59■□□□□ 0.57
VARS-224ENST00000479051 EMC4Q5J8M3 183 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 PAGE3Q5JUK9 113 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 PDZK1Q5T2W1 519 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 TYW3Q6IPR3 259 aaKnown RBP18.59■□□□□ 0.57
VARS-224ENST00000479051 LRRC74BQ6ZQY2 392 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 C10orf82Q8WW14 230 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 PMM1Q92871 262 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 PIGQQ9BRB3 760 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 SAP130Q9H0E3 1048 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 CAMK2AQ9UQM7 478 aa18.59■□□□□ 0.57
VARS-224ENST00000479051 SERINC4A6NH21 518 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 EVPLLA8MZ36 301 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 AHRRA9YTQ3 701 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 ZIC3O60481 467 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 ZG16O60844 167 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 ZIC2O95409 532 aaPredicted RBP18.58■□□□□ 0.56
VARS-224ENST00000479051 C1QCP02747 245 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 UBL4AP11441 157 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 ETFAP13804 333 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 LSP1P33241 339 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 FUT5Q11128 374 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 RGNQ15493 299 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 CD226Q15762 336 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 SYPL1Q16563 259 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 C1orf185Q5T7R7 199 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 B3GNT6Q6ZMB0 384 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 FRRS1Q6ZNA5 592 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 TMCO5AQ8N6Q1 288 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 ANKFN1Q8N957 763 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 DMRTA2Q96SC8 542 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 PRDM14Q9GZV8 571 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 CACYBPQ9HB71 228 aaKnown RBP18.58■□□□□ 0.56
VARS-224ENST00000479051 SAR1AQ9NR31 198 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 STOML1Q9UBI4 398 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 MYO7BQ6PIF6 2116 aa18.58■□□□□ 0.56
VARS-224ENST00000479051 B4DXG7 233 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 ZNF264O43296 627 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 EIF4E2O60573 245 aaKnown RBP18.57■□□□□ 0.56
VARS-224ENST00000479051 TNFRSF21O75509 655 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 UGT2B17O75795 530 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 NUDT14O95848 222 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 P2RX1P51575 399 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 MVDP53602 400 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 CRISP3P54108 245 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 GFRA1P56159 465 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 GNGT1P63211 74 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 ZNF117Q03924 483 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 KLF10Q13118 480 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 AP1ARQ63HQ0 302 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 EIF3MQ7L2H7 374 aaKnown RBP18.57■□□□□ 0.56
VARS-224ENST00000479051 SPATA21Q7Z572 469 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 CPLX4Q7Z7G2 160 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 DHDDSQ86SQ9 333 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 ULK2Q8IYT8 1036 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 ZNF808Q8N4W9 903 aaPredicted RBP18.57■□□□□ 0.56
VARS-224ENST00000479051 DPP10Q8N608 796 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 ZBTB8AQ96BR9 441 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 FAM107BQ9H098 131 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 MTHFD2LQ9H903 347 aaPredicted RBP18.57■□□□□ 0.56
VARS-224ENST00000479051 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.57■□□□□ 0.56
VARS-224ENST00000479051 SLC25A37Q9NYZ2 338 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 COQ3Q9NZJ6 369 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 VAPAQ9P0L0 249 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 SLC35A3Q9Y2D2 325 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 CARD8Q9Y2G2 431 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 CAPN7Q9Y6W3 813 aa18.57■□□□□ 0.56
VARS-224ENST00000479051 DIDO1Q9BTC0 2240 aaKnown RBP18.57■□□□□ 0.56
VARS-224ENST00000479051 LRRK2Q5S007 2527 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 GMNCA6NCL1 334 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 SLC22A2O15244 555 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 CCDC22O60826 627 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 CSTAP01040 98 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 CHRM4P08173 479 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 PEPDP12955 493 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 ZNF17P17021 662 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 HOXB9P17482 250 aaPredicted RBP18.56■□□□□ 0.56
VARS-224ENST00000479051 ADH7P40394 386 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 CHRNEQ04844 493 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 NFYCQ13952 458 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 MMEL1Q495T6 779 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 XKRXQ6PP77 449 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 ARSKQ6UWY0 536 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 OLIG3Q7RTU3 272 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 MRGPRGQ86SM5 289 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms