RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ING2Q9H160 280 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 PARLQ9H300 379 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 ABCB8Q9NUT2 735 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 PILRAQ9UKJ1 303 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 ITM2BQ9Y287 266 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 TMED7Q9Y3B3 224 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 MYO18AQ92614 2054 aaKnown RBP4.07□□□□□ -1.76
CCDC171-207ENST00000478913 MYH4Q9Y623 1939 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 IGHV4-30-2A0A087WSY4 118 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 IGHV3-20A0A0C4DH32 117 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 EPM2AB3EWF7 344 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 TRAFD1O14545 582 aaPredicted RBP4.07□□□□□ -1.76
CCDC171-207ENST00000478913 CLN5O75503 358 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 GLCEO94923 617 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 LETM1O95202 739 aaPredicted RBP4.07□□□□□ -1.76
CCDC171-207ENST00000478913 PTMSP20962 102 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 MUTP22033 750 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 CAPGP40121 348 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 ZFP36L1Q07352 338 aaKnown RBP4.07□□□□□ -1.76
CCDC171-207ENST00000478913 ENPP2Q13822 863 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 ACKR1Q16570 336 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 LRRC38Q5VT99 294 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 NHLRC1Q6VVB1 395 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 LINC00696Q6ZRV3 163 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 RFPL4BQ6ZWI9 263 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 FAM131BQ86XD5 332 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 Q8N9G6 341 aaPredicted RBP4.07□□□□□ -1.76
CCDC171-207ENST00000478913 RNF149Q8NC42 400 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 OR13C5Q8NGS8 318 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 SHC3Q92529 594 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 BPIFA2Q96DR5 249 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 CDKN2AIPNLQ96HQ2 116 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 CPB2Q96IY4 423 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 GAL3ST4Q96RP7 486 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 TRIM6Q9C030 488 aaPredicted RBP4.07□□□□□ -1.76
CCDC171-207ENST00000478913 CXCL16Q9H2A7 254 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 ZNF302Q9NR11 478 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 AKAP7Q9P0M2 348 aaPredicted RBP4.07□□□□□ -1.76
CCDC171-207ENST00000478913 LIPT1Q9Y234 373 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 CA5BQ9Y2D0 317 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 NUMA1Q14980 2115 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 NUP210Q8TEM1 1887 aaPredicted RBP4.07□□□□□ -1.76
CCDC171-207ENST00000478913 STAB2Q8WWQ8 2551 aa4.07□□□□□ -1.76
CCDC171-207ENST00000478913 CMYA5Q8N3K9 4069 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 USF3Q68DE3 2245 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 TRAV19A0A0A6YYK7 116 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 A0A0U1RQS6 177 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 LCE6AA0A183 80 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 A8MXK9 166 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 LMO7DNF2Z398 122 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 DDX39AO00148 427 aaKnown RBP4.06□□□□□ -1.76
CCDC171-207ENST00000478913 PDHBP11177 359 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 ATP5DP30049 168 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 DLSTP36957 453 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 CA7P43166 264 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 SNU13P55769 128 aaKnown RBP4.06□□□□□ -1.76
CCDC171-207ENST00000478913 SLC3A1Q07837 685 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 CEACAM7Q14002 265 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 UPP1Q16831 310 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 SNAI3Q3KNW1 292 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 KBTBD12Q3ZCT8 623 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 LYPLAL1Q5VWZ2 237 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 CENPPQ6IPU0 288 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 SIGLEC15Q6ZMC9 328 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 GPRIN3Q6ZVF9 776 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 CENPQQ7L2Z9 268 aaPredicted RBP4.06□□□□□ -1.76
CCDC171-207ENST00000478913 PIWIL3Q7Z3Z3 882 aaKnown RBP4.06□□□□□ -1.76
CCDC171-207ENST00000478913 KLHDC8AQ8IYD2 350 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 SLC43A2Q8N370 569 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 STKLD1Q8NE28 680 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 NPRL2Q8WTW4 380 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 CHPT1Q8WUD6 406 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 NAT6Q93015 286 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 SLC35C1Q96A29 364 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 UBAC1Q9BSL1 405 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 TRIM7Q9C029 511 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 ZNF350Q9GZX5 532 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 FNDC4Q9H6D8 234 aaPredicted RBP4.06□□□□□ -1.76
CCDC171-207ENST00000478913 KCNK13Q9HB14 408 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 SGK2Q9HBY8 427 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 SLC39A1Q9NY26 324 aa4.06□□□□□ -1.76
CCDC171-207ENST00000478913 MRPS18CQ9Y3D5 142 aaKnown RBP4.06□□□□□ -1.76
CCDC171-207ENST00000478913 INTS1Q8N201 2190 aaKnown RBP4.05□□□□□ -1.76
CCDC171-207ENST00000478913 MUC2Q02817 5179 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 IGHV3-38A0A0C4DH36 116 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 C13orf42A0A1B0GVH6 325 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 FAM170AA1A519 330 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 TTI1O43156 1089 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 TNFSF12O43508 249 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 SNAP91O60641 907 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 NME6O75414 186 aaPredicted RBP4.05□□□□□ -1.76
CCDC171-207ENST00000478913 POP4O95707 220 aaKnown RBP4.05□□□□□ -1.76
CCDC171-207ENST00000478913 HPRP00739 348 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 PRB2P02812 416 aaPredicted RBP4.05□□□□□ -1.76
CCDC171-207ENST00000478913 SELEP16581 610 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 MAGEB1P43366 347 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 EVCP57679 992 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 ACTG1P63261 375 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 FKBP3Q00688 224 aaKnown RBP4.05□□□□□ -1.76
CCDC171-207ENST00000478913 PAX8Q06710 450 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms