RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 AQP7O14520 342 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 IGKV3-11P04433 115 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 HMGN2P05204 90 aaKnown RBP13.2□□□□□ -0.3
USP11-207ENST00000478596 IFI6P09912 130 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 ZCCHC18P0CG32 403 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 GABRA1P14867 456 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 BMP5P22003 454 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 NRG3P56975 720 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 MTPNP58546 118 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 RNF4P78317 190 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 MGAT2Q10469 447 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 EBPQ15125 230 aaKnown RBP13.2□□□□□ -0.3
USP11-207ENST00000478596 CYP51A1Q16850 503 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP11-207ENST00000478596 LRIF1Q5T3J3 769 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 ATAD3BQ5T9A4 648 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 MFSD12Q6NUT3 480 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 C16orf89Q6UX73 402 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 TRILQ7L0X0 811 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 C16orf62Q7Z3J2 963 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 C6orf120Q7Z4R8 191 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 MDGA2Q7Z553 956 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 SLC44A2Q8IWA5 706 aaPredicted RBP13.2□□□□□ -0.3
USP11-207ENST00000478596 CYP4Z2PQ8N1L4 340 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 DPP10Q8N608 796 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 CDRT4Q8N9R6 151 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 APCDD1LQ8NCL9 501 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 PSMA8Q8TAA3 256 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 SLC22A8Q8TCC7 542 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 GPR151Q8TDV0 419 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 ADAMTS15Q8TE58 950 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 CTHRC1Q96CG8 243 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 LRRC58Q96CX6 371 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 NEURL3Q96EH8 262 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 SH3GL1Q99961 368 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 THUMPD3Q9BV44 507 aaKnown RBP13.2□□□□□ -0.3
USP11-207ENST00000478596 ACTRT3Q9BYD9 372 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 TPT1P8Q9HAU6 139 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 SLC6A13Q9NSD5 602 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.2□□□□□ -0.3
USP11-207ENST00000478596 ZNF407Q9C0G0 2248 aa13.2□□□□□ -0.3
USP11-207ENST00000478596 MBD3L4A6NDZ8 208 aaPredicted RBP13.19□□□□□ -0.3
USP11-207ENST00000478596 MBD3L5A6NJ08 208 aaPredicted RBP13.19□□□□□ -0.3
USP11-207ENST00000478596 CLIC1O00299 241 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 WWP2O00308 870 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 NME6O75414 186 aaPredicted RBP13.19□□□□□ -0.3
USP11-207ENST00000478596 MATN1P21941 496 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 IL12BP29460 328 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 GPR143P51810 404 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 RUNX1T1Q06455 604 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 PLCXD2Q0VAA5 305 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 POU4F3Q15319 338 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 SAXO2Q658L1 398 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 SLC22A16Q86VW1 577 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 TAGAPQ8N103 731 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 ZNF615Q8N8J6 731 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 ZFP90Q8TF47 636 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 PERPQ96FX8 193 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 CPPED1Q9BRF8 314 aaPredicted RBP13.19□□□□□ -0.3
USP11-207ENST00000478596 OR51I1Q9H343 314 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 TIMMDC1Q9NPL8 285 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 SLC52A3Q9NQ40 469 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 DEPPQ9NTK1 212 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 ADA2Q9NZK5 511 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 VAPAQ9P0L0 249 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 ZNF629Q9UEG4 869 aaPredicted RBP13.19□□□□□ -0.3
USP11-207ENST00000478596 ZNF639Q9UID6 485 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 ACAD8Q9UKU7 415 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 DTX4Q9Y2E6 619 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 LIPGQ9Y5X9 500 aa13.19□□□□□ -0.3
USP11-207ENST00000478596 FAM166BA8MTA8 275 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 SUSD5O60279 629 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 GLSO94925 669 aaPredicted RBP13.18□□□□□ -0.3
USP11-207ENST00000478596 NPPAP01160 153 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 CLPSP04118 112 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 TMED10P49755 219 aaKnown RBP13.18□□□□□ -0.3
USP11-207ENST00000478596 EMDP50402 254 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 CORO7P57737 925 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 DSTNP60981 165 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 DUSP8Q13202 625 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 KRTAP24-1Q3LI83 254 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 WLSQ5T9L3 541 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 CDC73Q6P1J9 531 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 POMZP3Q6PJE2 187 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 SEM1Q6ZVN7 128 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 PRR22Q8IZ63 422 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 OR5D16Q8NGK9 328 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 OR8K3Q8NH51 312 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 CDS1Q92903 461 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 SARAFQ96BY9 339 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 C16orf58Q96GQ5 468 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 LCORQ96JN0 433 aaPredicted RBP13.18□□□□□ -0.3
USP11-207ENST00000478596 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 DACH2Q96NX9 599 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 OR7D2Q96RA2 312 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 TTTY12Q9BZ98 90 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 LIN28AQ9H9Z2 209 aaKnown RBP13.18□□□□□ -0.3
USP11-207ENST00000478596 CACYBPQ9HB71 228 aaKnown RBP13.18□□□□□ -0.3
USP11-207ENST00000478596 EXD2Q9NVH0 621 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 SLC25A37Q9NYZ2 338 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms