RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 FAF1Q9UNN5 650 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 TRAF6Q9Y4K3 522 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 PTGDR2Q9Y5Y4 395 aa12.98□□□□□ -0.33
SMARCE1-209ENST00000478349 AKAP6Q13023 2319 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 A0A1W2PRB8 838 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 TLDC2A0PJX2 215 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 H0YC42 278 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 SCAMP2O15127 329 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 TMCC2O75069 709 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 SS18L1O75177 396 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 CGAP01215 116 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 IGKV1D-16P01601 117 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 TUBBP07437 444 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 FGF4P08620 206 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 ACP2P11117 423 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 BCKDHAP12694 445 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 TPD52P55327 224 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 SUMO3P55854 103 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 MAD2L1Q13257 205 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 TP53BP2Q13625 1128 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 GUSBP1Q15486 140 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 DUSP5Q16690 384 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 EXOC3L2Q2M3D2 409 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 PLPPR5Q32ZL2 321 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 HBMQ6B0K9 141 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 FIGNL1Q6PIW4 674 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 Q6ZSR9 355 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 GGNQ86UU5 652 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 EXOC3L1Q86VI1 746 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 ZNF610Q8N9Z0 462 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 SLC16A11Q8NCK7 471 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 OR2T11Q8NH01 316 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 OR4C3Q8NH37 302 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 OR2V1Q8NHB1 315 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 FBXO30Q8TB52 745 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 RNF145Q96MT1 663 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 RTN4RQ9BZR6 473 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 KLHL4Q9C0H6 718 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 OR10A4Q9H209 315 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 UBTD1Q9HAC8 227 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 MED17Q9NVC6 651 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 ATP6V1HQ9UI12 483 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 SNX8Q9Y5X2 465 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 DOCK7Q96N67 2140 aa12.97□□□□□ -0.33
SMARCE1-209ENST00000478349 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 DEFB108AA8MXU0 73 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 PIP5K1BO14986 540 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 ADAMDEC1O15204 470 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 AQP8O94778 261 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 NUDT14O95848 222 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 INHBBP09529 407 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 IL11P20809 199 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 ADH6P28332 368 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 CCKARP32238 428 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 LASP1Q14847 261 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 RNPS1Q15287 305 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 ACKR1Q16570 336 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 ZNF385BQ569K4 471 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 ARL13AQ5H913 290 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 Q5PR19 223 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 PRSS57Q6UWY2 283 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 APOOLQ6UXV4 268 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 TRABD2AQ86V40 505 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 GATSQ8NAP1 163 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 FAM110BQ8TC76 370 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 SFXN5Q8TD22 340 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 ADAMTS15Q8TE58 950 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 OR5P2Q8WZ92 322 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 CPNE4Q96A23 557 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 FAM120BQ96EK7 910 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 GIMAP5Q96F15 307 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 ZC3HAV1LQ96H79 300 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 SH3YL1Q96HL8 342 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 KLHL15Q96M94 604 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 TACO1Q9BSH4 297 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 ACTRT3Q9BYD9 372 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 PIGUQ9H490 435 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 ZNF395Q9H8N7 513 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 PLSCR4Q9NRQ2 329 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 BAIAP2L1Q9UHR4 511 aa12.96□□□□□ -0.33
SMARCE1-209ENST00000478349 PRRC2AP48634 2157 aaKnown RBP12.96□□□□□ -0.34
SMARCE1-209ENST00000478349 CXCL13O43927 109 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 HMGN2P05204 90 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 NUDT17P0C025 328 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 PRPS1L1P21108 318 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 TMEM201Q5SNT2 666 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 CDC73Q6P1J9 531 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 GALNT10Q86SR1 603 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 CXorf67Q86X51 503 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 KIRREL3Q8IZU9 778 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 BANPQ8N9N5 519 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 FNDC5Q8NAU1 212 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 PPP1R14CQ8TAE6 165 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 PHOSPHO1Q8TCT1 267 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 USB1Q9BQ65 265 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 BDH2Q9BUT1 245 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 C12orf65Q9H3J6 166 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 TUBB1Q9H4B7 451 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 GP6Q9HCN6 339 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 NGBQ9NPG2 151 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms