RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 SMG1Q96Q15 3661 aaKnown RBP18.19■□□□□ 0.5
ACTB-210ENST00000477812 COL6A6A6NMZ7 2263 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 CLDN24A6NM45 220 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 EBAG9O00559 213 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 OIP5O43482 229 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 NDUFB5O43674 189 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 RASAL1O95294 804 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 DBIP07108 87 aaKnown RBP18.19■□□□□ 0.5
ACTB-210ENST00000477812 NID1P14543 1247 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 HTR1EP28566 365 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 RFC3P40938 356 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 CLK3P49761 638 aaKnown RBP18.19■□□□□ 0.5
ACTB-210ENST00000477812 EEF1A1P68104 462 aaKnown RBP18.19■□□□□ 0.5
ACTB-210ENST00000477812 PACS2Q86VP3 889 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 VRK2Q86Y07 508 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 MISPQ8IVT2 679 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 OR52P1PQ8NH57 321 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 TAMM41Q96BW9 452 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 BTBD10Q9BSF8 475 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 TTTY12Q9BZ98 90 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 UBQLN3Q9H347 655 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 ZNF703Q9H7S9 590 aaPredicted RBP18.19■□□□□ 0.5
ACTB-210ENST00000477812 BOKQ9UMX3 212 aaPredicted RBP18.19■□□□□ 0.5
ACTB-210ENST00000477812 ZNF443Q9Y2A4 671 aaPredicted RBP18.19■□□□□ 0.5
ACTB-210ENST00000477812 NTNG1Q9Y2I2 539 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 CFAP46Q8IYW2 2715 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 FAM208BQ5VWN6 2430 aa18.19■□□□□ 0.5
ACTB-210ENST00000477812 ATP5HO75947 161 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 MFN2O95140 757 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 RFPL3SP0C7P2 107 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 PABPC4LP0CB38 370 aaKnown RBP18.18■□□□□ 0.5
ACTB-210ENST00000477812 ELAVL4P26378 380 aaKnown RBP18.18■□□□□ 0.5
ACTB-210ENST00000477812 PGM1P36871 562 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 NCALDP61601 193 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 KCNJ10P78508 379 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 C17orf67Q0P5P2 114 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 NFATC3Q12968 1075 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 SKP2Q13309 424 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 NDUFAF6Q330K2 333 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 INTS11Q5TA45 600 aaKnown RBP18.18■□□□□ 0.5
ACTB-210ENST00000477812 RNF220Q5VTB9 566 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 ZNF836Q6ZNA1 936 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 COMTD1Q86VU5 262 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 PLCZ1Q86YW0 608 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 CMIPQ8IY22 773 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 ARHGAP24Q8N264 748 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 ZNF614Q8N883 585 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 FAM156AQ8NDB6 213 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 OR2M3Q8NG83 312 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 DUSP19Q8WTR2 217 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 WDR60Q8WVS4 1066 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 GNRHR2Q96P88 292 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 KLHDC3Q9BQ90 382 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 PPP4R1LQ9P1A2 415 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 ANAPC2Q9UJX6 822 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 C15orf41Q9Y2V0 281 aa18.18■□□□□ 0.5
ACTB-210ENST00000477812 CDHR4A6H8M9 788 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 GNB5O14775 395 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 GYG2O15488 501 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 MASP1P48740 699 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 ZNF117Q03924 483 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 DMTNQ08495 405 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 DNAL1Q4LDG9 190 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 LIN52Q52LA3 116 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 MRPL2Q5T653 305 aaKnown RBP18.17■□□□□ 0.5
ACTB-210ENST00000477812 OR5M10Q6IEU7 315 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 CBLN3Q6UW01 205 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 PATL1Q86TB9 770 aaKnown RBP18.17■□□□□ 0.5
ACTB-210ENST00000477812 KRT73Q86Y46 540 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 SIAH3Q8IW03 269 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 FAM98AQ8NCA5 519 aaKnown RBP18.17■□□□□ 0.5
ACTB-210ENST00000477812 PHOSPHO1Q8TCT1 267 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 BARD1Q99728 777 aaKnown RBP18.17■□□□□ 0.5
ACTB-210ENST00000477812 LRMDAQ9H2I8 198 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 SDHAF3Q9NRP4 125 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.17■□□□□ 0.5
ACTB-210ENST00000477812 DNAJB12Q9NXW2 375 aaKnown RBP18.17■□□□□ 0.5
ACTB-210ENST00000477812 FBXL2Q9UKC9 423 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 ICAM5Q9UMF0 924 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 SLC35A3Q9Y2D2 325 aa18.17■□□□□ 0.5
ACTB-210ENST00000477812 TMEM229AB2RXF0 380 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 H3BNH8 94 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 M0QX08 132 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 PDE9AO76083 593 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 EPPINO95925 133 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 CSTAP01040 98 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 UBL4AP11441 157 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 IL7RP16871 459 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 GGT1P19440 569 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 CD247P20963 164 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 ENDOUP21128 410 aaKnown RBP18.16■□□□□ 0.5
ACTB-210ENST00000477812 PRKAR1BP31321 381 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 SOWAHCQ53LP3 525 aaPredicted RBP18.16■□□□□ 0.5
ACTB-210ENST00000477812 PRR30Q53SZ7 412 aaPredicted RBP18.16■□□□□ 0.5
ACTB-210ENST00000477812 ZNF324BQ6AW86 544 aaPredicted RBP18.16■□□□□ 0.5
ACTB-210ENST00000477812 DHRS4L2Q6PKH6 230 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 EIF3MQ7L2H7 374 aaKnown RBP18.16■□□□□ 0.5
ACTB-210ENST00000477812 TMEM251Q8N6I4 163 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 GPR32P1Q8NGA4 272 aa18.16■□□□□ 0.5
ACTB-210ENST00000477812 OR1J4Q8NGS1 313 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms