RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 HNF1AP20823 631 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 ZNF41P51814 821 aaPredicted RBP17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 RAB35Q15286 201 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 STK11Q15831 433 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 TMEM107Q6UX40 140 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 Q6ZT83 130 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 RPS27LQ71UM5 84 aaKnown RBP17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 TRABD2AQ86V40 505 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 CREG2Q8IUH2 290 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 CPNE4Q96A23 557 aaPredicted RBP17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 SRXN1Q9BYN0 137 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 PLA2G12AQ9BZM1 189 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 DDX18Q9NVP1 670 aaKnown RBP17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 UPK1AO00322 258 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 PPP6CO00743 305 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 IGKV1D-16P01601 117 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 NGFRP08138 427 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 SERPINB8P50452 374 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 LSM11P83369 360 aaKnown RBP eCLIP17.91■□□□□ 0.467e-14■■■■■ 59.8
PDLIM1-202ENST00000477757 UBAP2Q5T6F2 1119 aaKnown RBP17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 MEX3DQ86XN8 651 aaKnown RBP17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 LILRA2Q8N149 483 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 POC1BQ8TC44 478 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 ZNF483Q8TF39 744 aaPredicted RBP17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 C16orf78Q8WTQ4 265 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 MUCL1Q96DR8 90 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 DHRS9Q9BPW9 319 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 L2HGDHQ9H9P8 463 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 C3orf14Q9HBI5 128 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 TIGARQ9NQ88 270 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 NFU1Q9UMS0 254 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 MGAM2Q2M2H8 2515 aa17.91■□□□□ 0.46
PDLIM1-202ENST00000477757 E7EQL1 145 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 SPRY1O43609 319 aaPredicted RBP17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 NDUFB5O43674 189 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 SMIM24O75264 130 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 LYZL6O75951 148 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 KCNH1O95259 989 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 JUNP05412 331 aaKnown RBP17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 SHC1P29353 583 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 SFTPDP35247 375 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 NCBP2P52298 156 aaKnown RBP eCLIP17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 SLC18A2Q05940 514 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 SQLEQ14534 574 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 SPIN4Q56A73 249 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 TCHHL1Q5QJ38 904 aaPredicted RBP17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 TIMM23BQ5SRD1 257 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 Q6ZSR9 355 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 PLD6Q8N2A8 252 aaKnown RBP17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 MUC15Q8N387 334 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 DPH5Q9H2P9 285 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 GRHL1Q9NZI5 618 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 DMGDHQ9UI17 866 aaKnown RBP17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 ZNF225Q9UK10 706 aa17.9■□□□□ 0.46
PDLIM1-202ENST00000477757 LOC100289279A0A1B0GTE1 492 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 GXYLT2A0PJZ3 443 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 TTC36A6NLP5 189 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 MANBAO00462 879 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 OXSR1O95747 527 aaPredicted RBP17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 YES1P07947 543 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 RBP1P09455 135 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 CHN1P15882 459 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 COX5AP20674 150 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 ELK4P28324 431 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 TYK2P29597 1187 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 TIA1P31483 386 aaKnown RBP eCLIP17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 OR3A2P47893 321 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 MANFP55145 182 aaKnown RBP17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 SLC29A2Q14542 456 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 GALNT18Q6P9A2 607 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 FCRLAQ7L513 359 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 FBXL14Q8N1E6 418 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 GATSQ8NAP1 163 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 ACPTQ9BZG2 426 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 VPS11Q9H270 941 aa17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 EML4Q9HC35 981 aaKnown RBP17.89■□□□□ 0.45
PDLIM1-202ENST00000477757 PRKD3O94806 890 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 OR4F21O95013 312 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 KRT6AP02538 564 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 KRT6BP04259 564 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 TSPAN8P19075 237 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 DDCP20711 480 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 GABRA3P34903 492 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 GSTM5P46439 218 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 KRT6CP48668 564 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 EFNA4P52798 201 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 CDH13P55290 713 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 MRPS25P82663 173 aaKnown RBP17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 ACSM2AQ08AH3 577 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 PRSS53Q2L4Q9 553 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 ACSM2BQ68CK6 577 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 P2RY8Q86VZ1 359 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 CDYL2Q8N8U2 506 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 OR4C3Q8NH37 302 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 MSI2Q96DH6 328 aaKnown RBP17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 KLHDC3Q9BQ90 382 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 ERP44Q9BS26 406 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 C1QTNF3Q9BXJ4 246 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 BCO1Q9HAY6 547 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 RNF14Q9UBS8 474 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms