RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CBLCQ9ULV8 474 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 ASCC3Q8N3C0 2202 aaKnown RBP11.16□□□□□ -0.62
PRPF39-203ENST00000477626 PMS2P1A4D2B8 440 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 B4E171 279 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF701M0R085 212 aaPredicted RBP11.15□□□□□ -0.62
PRPF39-203ENST00000477626 TSPAN7P41732 249 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 CRISP1P54107 249 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 RAD23AP54725 363 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF613Q6PF04 617 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 FIGNL1Q6PIW4 674 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 LINC00471Q8N535 108 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 OR14A16Q8NHC5 309 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 VANGL1Q8TAA9 524 aaPredicted RBP11.15□□□□□ -0.62
PRPF39-203ENST00000477626 SLC9A6Q92581 669 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 CNOT9Q92600 299 aaKnown RBP11.15□□□□□ -0.62
PRPF39-203ENST00000477626 DDOQ99489 341 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 NXF5Q9H1B4 397 aaKnown RBP11.15□□□□□ -0.62
PRPF39-203ENST00000477626 SERTAD3Q9UJW9 196 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 SMIM31A0A1B0GVY4 71 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 CLDN4O14493 209 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 PIP5K1CO60331 668 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 ABCB7O75027 752 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 SYPP08247 313 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 UGT2B15P54855 530 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 RPS4XP62701 263 aaKnown RBP11.15□□□□□ -0.62
PRPF39-203ENST00000477626 TCF15Q12870 199 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 COX10Q12887 443 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 PDZK1Q5T2W1 519 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 TMPRSS11FQ6ZWK6 438 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 C16orf62Q7Z3J2 963 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 OR4K5Q8NGD3 323 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 SLC41A3Q96GZ6 507 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 FRMD6Q96NE9 622 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 C20orf141Q9NUB4 165 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 ICAM5Q9UMF0 924 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 MRPS33Q9Y291 106 aaKnown RBP11.15□□□□□ -0.62
PRPF39-203ENST00000477626 SAGE2PA6NJ88 616 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 A8MU76 341 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 ITIH1P19827 911 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 TGFBR2P37173 567 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 TSPAN31Q12999 210 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 DESI1Q6ICB0 168 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 NUP54Q7Z3B4 507 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 GLRX5Q86SX6 157 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 SLC44A2Q8IWA5 706 aaPredicted RBP11.15□□□□□ -0.62
PRPF39-203ENST00000477626 STT3BQ8TCJ2 826 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 ACOT11Q8WXI4 607 aaPredicted RBP11.15□□□□□ -0.62
PRPF39-203ENST00000477626 TIMP4Q99727 224 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 NDC1Q9BTX1 674 aa11.15□□□□□ -0.62
PRPF39-203ENST00000477626 SDK1Q7Z5N4 2213 aa11.15□□□□□ -0.63
PRPF39-203ENST00000477626 MPDZO75970 2070 aa11.15□□□□□ -0.63
PRPF39-203ENST00000477626 BHLHE40O14503 412 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 AP3D1O14617 1153 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 PIPP12273 146 aaPredicted RBP11.14□□□□□ -0.63
PRPF39-203ENST00000477626 CYP4B1P13584 511 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 MAKP20794 623 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 ATP12AP54707 1039 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 INSM1Q01101 510 aaPredicted RBP11.14□□□□□ -0.63
PRPF39-203ENST00000477626 OR1Q1Q15612 314 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 CNPY1Q3B7I2 92 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 FLYWCH1Q4VC44 716 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 DEF8Q6ZN54 512 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 RASSF6Q6ZTQ3 369 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 COX18Q8N8Q8 333 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 OR4Q3Q8NH05 313 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 C14orf105Q9NVL8 296 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 GNGT2O14610 69 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 CLPTM1O96005 669 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 CFIP05156 583 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 ZNF267Q14586 743 aaPredicted RBP11.14□□□□□ -0.63
PRPF39-203ENST00000477626 OCLNQ16625 522 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 NKAIN1Q4KMZ8 207 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 EIPR1Q53HC9 387 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 UBE2UQ5VVX9 321 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 BROXQ5VW32 411 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 OR8K3Q8NH51 312 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 ELP5Q8TE02 316 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 YIPF6Q96EC8 236 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 JAM3Q9BX67 310 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 UCK2Q9BZX2 261 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 ADAM19Q9H013 955 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 ENKD1Q9H0I2 346 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 DSN1Q9H410 356 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 CDC14AQ9UNH5 594 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 CLCA2Q9UQC9 943 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 SLC9A8Q9Y2E8 581 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 GOLGA4Q13439 2230 aaKnown RBP11.14□□□□□ -0.63
PRPF39-203ENST00000477626 E2F6O75461 281 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 PCOLCEQ15113 449 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 ZSWIM7Q19AV6 140 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 ATAD3BQ5T9A4 648 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 SLC46A3Q7Z3Q1 461 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 PEX5LQ8IYB4 626 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 PRSS33Q8NF86 280 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 BRIX1Q8TDN6 353 aaKnown RBP11.14□□□□□ -0.63
PRPF39-203ENST00000477626 TP53INP1Q96A56 240 aa11.14□□□□□ -0.63
PRPF39-203ENST00000477626 IGLV3-32A0A0A0MS00 114 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 FLRT2O43155 660 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 SCRG1O75711 98 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 SLC5A2P31639 672 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms