RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ATP5HO75947 161 aa14□□□□□ -0.17
SEC13-215ENST00000477547 PDE9AO76083 593 aa14□□□□□ -0.17
SEC13-215ENST00000477547 SNX4O95219 450 aa14□□□□□ -0.17
SEC13-215ENST00000477547 ANGPTL1O95841 491 aa14□□□□□ -0.17
SEC13-215ENST00000477547 DBIP07108 87 aaKnown RBP14□□□□□ -0.17
SEC13-215ENST00000477547 ETS2P15036 469 aa14□□□□□ -0.17
SEC13-215ENST00000477547 CNR1P21554 472 aa14□□□□□ -0.17
SEC13-215ENST00000477547 PCBP3P57721 371 aaKnown RBP14□□□□□ -0.17
SEC13-215ENST00000477547 PMP22Q01453 160 aa14□□□□□ -0.17
SEC13-215ENST00000477547 CD226Q15762 336 aa14□□□□□ -0.17
SEC13-215ENST00000477547 MAPK14Q16539 360 aa14□□□□□ -0.17
SEC13-215ENST00000477547 LIN52Q52LA3 116 aa14□□□□□ -0.17
SEC13-215ENST00000477547 APOOLQ6UXV4 268 aa14□□□□□ -0.17
SEC13-215ENST00000477547 MARCH3Q86UD3 253 aa14□□□□□ -0.17
SEC13-215ENST00000477547 PTRH1Q86Y79 214 aaKnown RBP14□□□□□ -0.17
SEC13-215ENST00000477547 OIT3Q8WWZ8 545 aa14□□□□□ -0.17
SEC13-215ENST00000477547 TMEM41AQ96HV5 264 aa14□□□□□ -0.17
SEC13-215ENST00000477547 RTN4RQ9BZR6 473 aa14□□□□□ -0.17
SEC13-215ENST00000477547 PROK2Q9HC23 129 aa14□□□□□ -0.17
SEC13-215ENST00000477547 TUBA8Q9NY65 449 aaPredicted RBP14□□□□□ -0.17
SEC13-215ENST00000477547 ZNF443Q9Y2A4 671 aaPredicted RBP14□□□□□ -0.17
SEC13-215ENST00000477547 DTNAQ9Y4J8 743 aa14□□□□□ -0.17
SEC13-215ENST00000477547 HRH3Q9Y5N1 445 aa14□□□□□ -0.17
SEC13-215ENST00000477547 LRRK2Q5S007 2527 aa14□□□□□ -0.17
SEC13-215ENST00000477547 UTP20O75691 2785 aaKnown RBP13.99□□□□□ -0.17
SEC13-215ENST00000477547 C2orf72A6NCS6 295 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 LRRC3CA6NJW4 275 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 C17orf51A8MQB3 221 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 ADAM10O14672 748 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 GNB5O14775 395 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 SNPHO15079 494 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 GSTA4O15217 222 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 PDE5AO76074 875 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 OPN1SWP03999 348 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 UBL4AP11441 157 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 HSD17B1P14061 328 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 TCN1P20061 433 aaPredicted RBP13.99□□□□□ -0.17
SEC13-215ENST00000477547 RFC3P40938 356 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 RASSF2P50749 326 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 GAS1P54826 345 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 NCALDP61601 193 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 PLGLB1Q02325 96 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 VEZF1Q14119 521 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 FGFBP1Q14512 234 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 IGFBP7Q16270 282 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 PLEKHN1Q494U1 663 aaPredicted RBP13.99□□□□□ -0.17
SEC13-215ENST00000477547 LRRC23Q53EV4 343 aaPredicted RBP13.99□□□□□ -0.17
SEC13-215ENST00000477547 C4orf17Q53FE4 359 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 KLHL26Q53HC5 615 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 FNDC7Q5VTL7 733 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 HIST2H2BCQ6DN03 193 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 ZNF836Q6ZNA1 936 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.99□□□□□ -0.17
SEC13-215ENST00000477547 PATL1Q86TB9 770 aaKnown RBP13.99□□□□□ -0.17
SEC13-215ENST00000477547 PACS2Q86VP3 889 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 VRK2Q86Y07 508 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 MISPQ8IVT2 679 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 ARHGAP24Q8N264 748 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 TMCO5AQ8N6Q1 288 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 Q8NA96 180 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 FAM156AQ8NDB6 213 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 TNIP2Q8NFZ5 429 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 OR52P1PQ8NH57 321 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 PHOSPHO1Q8TCT1 267 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 PMM1Q92871 262 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 FRMD6Q96NE9 622 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 ZNF607Q96SK3 696 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 BTBD10Q9BSF8 475 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 SPATA5L1Q9BVQ7 753 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 MTHFD2LQ9H903 347 aaPredicted RBP13.99□□□□□ -0.17
SEC13-215ENST00000477547 SDHAF3Q9NRP4 125 aa13.99□□□□□ -0.17
SEC13-215ENST00000477547 GPC6Q9Y625 555 aaPredicted RBP13.99□□□□□ -0.17
SEC13-215ENST00000477547 SERINC4A6NH21 518 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 ACOT7O00154 380 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 CXCR6O00574 342 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 TRIM3O75382 744 aaPredicted RBP13.98□□□□□ -0.17
SEC13-215ENST00000477547 SORBS2O94875 1100 aaKnown RBP13.98□□□□□ -0.17
SEC13-215ENST00000477547 RASAL1O95294 804 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 THBS1P07996 1170 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 PABPC4LP0CB38 370 aaKnown RBP13.98□□□□□ -0.17
SEC13-215ENST00000477547 NID1P14543 1247 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 IL7RP16871 459 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 ELAVL4P26378 380 aaKnown RBP13.98□□□□□ -0.17
SEC13-215ENST00000477547 HTR1EP28566 365 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 CEACAM7Q14002 265 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 LARS2Q15031 903 aaKnown RBP13.98□□□□□ -0.17
SEC13-215ENST00000477547 NDUFAF6Q330K2 333 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 SPATS1Q496A3 300 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 MRPL2Q5T653 305 aaKnown RBP13.98□□□□□ -0.17
SEC13-215ENST00000477547 FIG4Q92562 907 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 CCDC124Q96CT7 223 aaKnown RBP13.98□□□□□ -0.17
SEC13-215ENST00000477547 ZG16BQ96DA0 208 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 SH3YL1Q96HL8 342 aaPredicted RBP13.98□□□□□ -0.17
SEC13-215ENST00000477547 THTPAQ9BU02 230 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 TTTY12Q9BZ98 90 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 B4GALT7Q9UBV7 327 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 SEC14L3Q9UDX4 400 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 EGFL7Q9UHF1 273 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 SLC35A3Q9Y2D2 325 aa13.98□□□□□ -0.17
SEC13-215ENST00000477547 SPTAN1Q13813 2472 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms