RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 LRRC70Q7Z2Q7 622 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 SERINC5Q86VE9 423 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 SERPINA9Q86WD7 417 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 CSNK1A1LQ8N752 337 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 Q8N9G6 341 aaPredicted RBP4.52□□□□□ -1.69
VPS50-212ENST00000476413 OR2T33Q8NG76 320 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 FBXO30Q8TB52 745 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 SDSLQ96GA7 329 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 SENP8Q96LD8 212 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 DUSP16Q9BY84 665 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 NT5C3AQ9H0P0 336 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 CUTCQ9NTM9 273 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 GNG12Q9UBI6 72 aa4.52□□□□□ -1.69
VPS50-212ENST00000476413 MRPS7Q9Y2R9 242 aaKnown RBP4.52□□□□□ -1.69
VPS50-212ENST00000476413 GPR89AB7ZAQ6 455 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 BCL2L11O43521 198 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 CD55P08174 381 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 H2AFZP0C0S5 128 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 GPR89BP0CG08 455 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 SLC35E2P0CK97 266 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 GLRA2P23416 452 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 PRPHP41219 470 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 LMO4P61968 165 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 CSTF1Q05048 431 aaKnown RBP4.51□□□□□ -1.69
VPS50-212ENST00000476413 Q1RN00 199 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 TIMM50Q3ZCQ8 353 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 TEX44Q53QW1 395 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 CFAP157Q5JU67 520 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 GPR65Q8IYL9 337 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 TYMSOSQ8TAI1 123 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 TFB1MQ8WVM0 346 aaKnown RBP4.51□□□□□ -1.69
VPS50-212ENST00000476413 RIT2Q99578 217 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 SLC6A7Q99884 636 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 OMDQ99983 421 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 IKZF5Q9H5V7 419 aa4.51□□□□□ -1.69
VPS50-212ENST00000476413 PNO1Q9NRX1 252 aaKnown RBP4.51□□□□□ -1.69
VPS50-212ENST00000476413 OR6C65A6NJZ3 312 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 SCRG1O75711 98 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 NOL4O94818 638 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 ADCY5O95622 1261 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 CA1P00915 261 aaPredicted RBP4.5□□□□□ -1.69
VPS50-212ENST00000476413 FASP25445 335 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 HPCAL1P37235 193 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 GNPDA1P46926 289 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 RPL34P49207 117 aaKnown RBP4.5□□□□□ -1.69
VPS50-212ENST00000476413 ACTR1AP61163 376 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 VLDLRP98155 873 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 KCNJ11Q14654 390 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 LAGE3Q14657 143 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 TPD52L1Q16890 204 aaPredicted RBP4.5□□□□□ -1.69
VPS50-212ENST00000476413 C15orf32Q32M92 178 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 SPATA46Q5T0L3 261 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 OR8G2PQ6IF36 304 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 FAM71F2Q6NXP2 309 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 CASC1Q6TDU7 716 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 RGS9BPQ6ZS82 235 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 ANKFN1Q8N957 763 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 KLHL30-AS1Q8NEE0 82 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 OR5L2Q8NGL0 311 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 ZNF606Q8WXB4 792 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 RLN3Q8WXF3 142 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 CTNNBL1Q8WYA6 563 aaPredicted RBP4.5□□□□□ -1.69
VPS50-212ENST00000476413 C12orf66Q96MD2 445 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 AMDHD1Q96NU7 426 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 CITED1Q99966 193 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 DPH7Q9BTV6 452 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 RAB18Q9NP72 206 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 MIEF1Q9NQG6 463 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 SIGLEC8Q9NYZ4 499 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 WRAP73Q9P2S5 460 aaPredicted RBP4.5□□□□□ -1.69
VPS50-212ENST00000476413 EXTL2Q9UBQ6 330 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 RNF14Q9UBS8 474 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 XPO7Q9UIA9 1087 aaKnown RBP4.5□□□□□ -1.69
VPS50-212ENST00000476413 ZNF221Q9UK13 617 aa4.5□□□□□ -1.69
VPS50-212ENST00000476413 K7ENP7 123 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 DUSP14O95147 198 aaKnown RBP4.49□□□□□ -1.69
VPS50-212ENST00000476413 GIG44P09565 113 aaPredicted RBP4.49□□□□□ -1.69
VPS50-212ENST00000476413 PGAM2P15259 253 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 MAGEA9P43362 315 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 STARP49675 285 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 SLC8A3P57103 927 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 RIPPLY1Q0D2K3 151 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 IL24Q13007 206 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 WSCD1Q658N2 575 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 ZNF683Q8IZ20 524 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 CLDN19Q8N6F1 224 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 CCT8L2Q96SF2 557 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 ELOVL4Q9GZR5 314 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 PNNQ9H307 717 aaKnown RBP4.49□□□□□ -1.69
VPS50-212ENST00000476413 GLIPR2Q9H4G4 154 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS50-212ENST00000476413 SAMD4AQ9UPU9 718 aaKnown RBP4.49□□□□□ -1.69
VPS50-212ENST00000476413 WDR45Q9Y484 360 aa4.49□□□□□ -1.69
VPS50-212ENST00000476413 FRMPD4Q14CM0 1322 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 PTCH1Q13635 1447 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.48□□□□□ -1.69
VPS50-212ENST00000476413 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.48□□□□□ -1.69
VPS50-212ENST00000476413 A0A1W2PNV4 684 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 H3BMQ9 156 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 OR7A17O14581 309 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms