RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 KLHL26Q53HC5 615 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 XKR7Q5GH72 579 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 C6orf136Q5SQH8 315 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 STAC2Q6ZMT1 411 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ZCCHC23Q6ZST2 131 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 BIVMQ86UB2 503 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 TRABD2AQ86V40 505 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 LSRQ86X29 649 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 RIMKLAQ8IXN7 391 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 KRTCAP2Q8N6L1 136 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 CEP70Q8NHQ1 597 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 PSMA8Q8TAA3 256 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ACTRT2Q8TDY3 377 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 TWIST2Q8WVJ9 160 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 CDS1Q92903 461 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ARSGQ96EG1 525 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ZBED6CLQ96FA7 236 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 PIK3IP1Q96FE7 263 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 SH3YL1Q96HL8 342 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 C18orf12Q96KH6 178 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 RNF145Q96MT1 663 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 PIP5K1AQ99755 562 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 SLC39A3Q9BRY0 314 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 TRMOQ9BU70 441 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 MED18Q9BUE0 208 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 TMEM185BQ9H7F4 350 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF395Q9H8N7 513 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-207ENST00000475549 UBQLN4Q9NRR5 601 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 GPATCH2Q9NW75 528 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF226Q9NYT6 803 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ATP6V1HQ9UI12 483 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ZDHHC2Q9UIJ5 367 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ICAM5Q9UMF0 924 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 PROCRQ9UNN8 238 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 TMED5Q9Y3A6 229 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 ZANQ9Y493 2812 aa6.28□□□□□ -1.4
HDAC3-207ENST00000475549 MPDZO75970 2070 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 A0A087WZY1 265 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 NPIPA5A0A0B4J1W7 369 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 TLDC2A0PJX2 215 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 TRIM64A6NGJ6 449 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 TRIM64BA6NI03 449 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 ESPNB1AK53 854 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 NPIPA7E9PJI5 369 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 SCAMP2O15127 329 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 CXCL13O43927 109 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 PEX11AO75192 247 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 SPAG7O75391 227 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 SLU7O95391 586 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 LY6G6DO95868 133 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 INHBBP09529 407 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 ALOX5P09917 674 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 NPIPA8P0DM63 369 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 KCNJ5P48544 419 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 CCT3P49368 545 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 CLK3P49761 638 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 RPS3AP61247 264 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF117Q03924 483 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 LTBQ06643 244 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 CAPRIN1Q14444 709 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 LASP1Q14847 261 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 EXOC3L2Q2M3D2 409 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 NDUFAF6Q330K2 333 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 VPS26BQ4G0F5 336 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 Q5PR19 223 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 ZCCHC12Q6PEW1 402 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 LRIG3Q6UXM1 1119 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 ESPNLQ6ZVH7 1005 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 OLIG3Q7RTU3 272 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 WDR75Q8IWA0 830 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 LILRA2Q8N149 483 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 LRRC75A-AS1Q8N1F1 130 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 OR6K3Q8NGY3 331 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 LILRB1Q8NHL6 650 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 AGR3Q8TD06 166 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 TCP10LQ8TDR4 215 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 ROBO4Q8WZ75 1007 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 OSTF1Q92882 214 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 ZBTB8AQ96BR9 441 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 COQ8BQ96D53 544 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 MTERF3Q96E29 417 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 DTNBP1Q96EV8 351 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 GMPPAQ96IJ6 420 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 APOPT1Q96IL0 206 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 MS4A4EQ96PG1 132 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 KCNK17Q96T54 332 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 STACQ99469 402 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 C1orf50Q9BV19 199 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 REPIN1Q9BWE0 567 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 BTBD2Q9BX70 525 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 SRXN1Q9BYN0 137 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 KLHL4Q9C0H6 718 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 PIGUQ9H490 435 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 SERHL2Q9H4I8 314 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 CXorf36Q9H7Y0 433 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 PPCSQ9HAB8 311 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 C3orf14Q9HBI5 128 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 ZCCHC3Q9NUD5 404 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 MKS1Q9NXB0 559 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms