RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 LINC01387J3KSC0 135 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 ZNF195O14628 629 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 SEC14L5O43304 696 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 HCRTR2O43614 444 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 AK1P00568 194 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 ZNF41P51814 821 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-223ENST00000475146 ZNF136P52737 540 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 ATP12AP54707 1039 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 PPP2R2AP63151 447 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 GSTA3Q16772 222 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 SAXO2Q658L1 398 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 TNFAIP8L2Q6P589 184 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-223ENST00000475146 C16orf62Q7Z3J2 963 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 GRAMD2AQ8IUY3 354 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 RELL2Q8NC24 303 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-223ENST00000475146 GLB1L3Q8NCI6 653 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-223ENST00000475146 B4GALNT2Q8NHY0 566 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 PANX1Q96RD7 426 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 SDF2Q99470 211 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 TRIM8Q9BZR9 551 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 INTS9Q9NV88 658 aaKnown RBP21.71■■□□□ 1.07
CPNE1-223ENST00000475146 EXD2Q9NVH0 621 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 ZNF337Q9Y3M9 751 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 A0A087WZY1 265 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 UBDO15205 165 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 SLC22A3O75751 556 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 TMIGD3P0DMS9 266 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-223ENST00000475146 OR12D1P0DN82 309 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 KHKP50053 298 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 ATAD3BQ5T9A4 648 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 MTERF4Q7Z6M4 381 aaKnown RBP21.7■■□□□ 1.06
CPNE1-223ENST00000475146 ACBD4Q8NC06 268 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 CHDHQ8NE62 594 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-223ENST00000475146 MIPOL1Q8TD10 442 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 WNT2BQ93097 391 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 NEURL3Q96EH8 262 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 TM9SF2Q99805 663 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 INPP5KQ9BT40 448 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 CLCF1Q9UBD9 225 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 ZNF629Q9UEG4 869 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-223ENST00000475146 HCFC1P51610 2035 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 PCNX3Q9H6A9 2034 aa21.7■■□□□ 1.06
CPNE1-223ENST00000475146 NOTCH2Q04721 2471 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 CCDC154A6NI56 674 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 STX11O75558 287 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 AGR2O95994 175 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 CTSSP25774 331 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 AGFG1P52594 562 aaKnown RBP21.69■■□□□ 1.06
CPNE1-223ENST00000475146 EEFSECP57772 596 aaKnown RBP21.69■■□□□ 1.06
CPNE1-223ENST00000475146 LRRC74AQ0VAA2 488 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 GPR68Q15743 365 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 KLHL26Q53HC5 615 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.69■■□□□ 1.06
CPNE1-223ENST00000475146 EPGNQ6UW88 154 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 P4HA3Q7Z4N8 544 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 ADGRE4PQ86SQ3 457 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 TRIML2Q8N7C3 387 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 XAGE5Q8WWM1 108 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 RAB8BQ92930 207 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 MED17Q9NVC6 651 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 ZIM2Q9NZV7 527 aa21.69■■□□□ 1.06
CPNE1-223ENST00000475146 INTS1Q8N201 2190 aaKnown RBP21.69■■□□□ 1.06
CPNE1-223ENST00000475146 NPIPB9F8W1W9 429 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 GTPBP1O00178 669 aaKnown RBP21.68■■□□□ 1.06
CPNE1-223ENST00000475146 TNFRSF21O75509 655 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 NUDT14O95848 222 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 ZNF17P17021 662 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 IGFBP2P18065 325 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 ASCL1P50553 236 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 ZNF117Q03924 483 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 ARHGAP11BQ3KRB8 267 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 ZNF621Q6ZSS3 439 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 OLIG3Q7RTU3 272 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 ZBTB8AQ96BR9 441 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 UCN2Q96RP3 112 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 SDR39U1Q9NRG7 319 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-223ENST00000475146 CARD8Q9Y2G2 431 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 DTNAQ9Y4J8 743 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 AP4B1Q9Y6B7 739 aa21.68■■□□□ 1.06
CPNE1-223ENST00000475146 DOCK7Q96N67 2140 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 H0YC42 278 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 POLR3GO15318 223 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-223ENST00000475146 SASH3O75995 380 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 IL6P05231 212 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 GSNP06396 782 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 UQCRC1P31930 480 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 OPRM1P35372 400 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 CDKN2CP42773 168 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 SUCLG1P53597 346 aaKnown RBP21.67■■□□□ 1.06
CPNE1-223ENST00000475146 TPD52P55327 224 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-223ENST00000475146 CLDN20P56880 219 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 TMEM44Q2T9K0 475 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 PLPPR5Q32ZL2 321 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 NDUFAF6Q330K2 333 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 PDZK1Q5T2W1 519 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 DNAJC14Q6Y2X3 702 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-223ENST00000475146 RNF130Q86XS8 419 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 ZNF295-AS1Q8N0V1 137 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 GCNT2Q8N0V5 402 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 MIER2Q8N344 545 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms