RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TBL1XR1Q9BZK7 514 aa13.71□□□□□ -0.21
VARS-223ENST00000474643 CXorf36Q9H7Y0 433 aa13.71□□□□□ -0.21
VARS-223ENST00000474643 TCF7L2Q9NQB0 619 aa13.71□□□□□ -0.21
VARS-223ENST00000474643 RASSF1Q9NS23 344 aa13.71□□□□□ -0.21
VARS-223ENST00000474643 SIRT3Q9NTG7 399 aaPredicted RBP13.71□□□□□ -0.21
VARS-223ENST00000474643 CCM2LQ9NUG4 571 aaPredicted RBP13.71□□□□□ -0.21
VARS-223ENST00000474643 FGFR1OP2Q9NVK5 253 aa13.71□□□□□ -0.21
VARS-223ENST00000474643 KLHL14Q9P2G3 628 aa13.71□□□□□ -0.21
VARS-223ENST00000474643 GPR45Q9Y5Y3 372 aa13.71□□□□□ -0.21
VARS-223ENST00000474643 ANKHD1Q8IWZ3 2542 aaKnown RBP13.7□□□□□ -0.22
VARS-223ENST00000474643 PRSS51A0A1B0GVH4 220 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 GXYLT2A0PJZ3 443 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 CASKO14936 926 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 TSPAN2O60636 221 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 SLC22A3O75751 556 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 SMNDC1O75940 238 aaKnown RBP eCLIP13.7□□□□□ -0.224e-7■■■□□ 17.2
VARS-223ENST00000474643 HMGN2P05204 90 aaKnown RBP13.7□□□□□ -0.22
VARS-223ENST00000474643 ACP2P11117 423 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 HK1P19367 917 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 CHMP24386 653 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 STARP49675 285 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 IST1P53990 364 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 DSCR4P56555 118 aaPredicted RBP13.7□□□□□ -0.22
VARS-223ENST00000474643 EEFSECP57772 596 aaKnown RBP13.7□□□□□ -0.22
VARS-223ENST00000474643 EEF1A1P68104 462 aaKnown RBP13.7□□□□□ -0.22
VARS-223ENST00000474643 HBA1P69905 142 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 SORDQ00796 357 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 PDCD4Q53EL6 469 aaKnown RBP13.7□□□□□ -0.22
VARS-223ENST00000474643 EEF1A1P5Q5VTE0 462 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 METTL21CQ5VZV1 264 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 OR2A2Q6IF42 318 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 MFSD12Q6NUT3 480 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 ZCCHC12Q6PEW1 402 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 MIER2Q8N344 545 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 CNEP1R1Q8N9A8 125 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 GLB1L3Q8NCI6 653 aaPredicted RBP13.7□□□□□ -0.22
VARS-223ENST00000474643 ADAMTS15Q8TE58 950 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 WNT2BQ93097 391 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 C16orf58Q96GQ5 468 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 DSN1Q9H410 356 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 TMEM45AQ9NWC5 275 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 FAM120CQ9NX05 1096 aaKnown RBP13.7□□□□□ -0.22
VARS-223ENST00000474643 NTMQ9P121 344 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 ST6GALNAC2Q9UJ37 374 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 ABCG2Q9UNQ0 655 aa13.7□□□□□ -0.22
VARS-223ENST00000474643 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 RNF103-CHMP3A0A140T963 221 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 SLC22A20A6NK97 555 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 ANKRD28O15084 1053 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 GMFGO60234 142 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 NKX2-2O95096 273 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 EPXP11678 715 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 PEPDP12955 493 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 MRPL19P49406 292 aaKnown RBP13.69□□□□□ -0.22
VARS-223ENST00000474643 IDH3AP50213 366 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 GYS2P54840 703 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 POU6F2P78424 691 aaPredicted RBP13.69□□□□□ -0.22
VARS-223ENST00000474643 KEAP1Q14145 624 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 GANABQ14697 944 aaKnown RBP13.69□□□□□ -0.22
VARS-223ENST00000474643 TESK1Q15569 626 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 DUSP5Q16690 384 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 GALNT10Q86SR1 603 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 CDC20BQ86Y33 519 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 SLC16A11Q8NCK7 471 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 LINC01560Q8TB33 94 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 SMPDL3BQ92485 455 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 GIMAP5Q96F15 307 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 SLC35G5Q96KT7 338 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 TEX37Q96LM6 180 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 OR52E6Q96RD3 313 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 ACTRT3Q9BYD9 372 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 PIGMQ9H3S5 423 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 NPHS2Q9NP85 383 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 STOML1Q9UBI4 398 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 NDRG3Q9UGV2 375 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 PACSIN3Q9UKS6 424 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 PLEKHA6Q9Y2H5 1048 aa13.69□□□□□ -0.22
VARS-223ENST00000474643 H3BML4 177 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 SEC14L5O43304 696 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 RCBTB2O95199 551 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 IL33O95760 270 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 IL6P05231 212 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 PGRP06401 933 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 HPGDP15428 266 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 ATP6V1C1P21283 382 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 CHI3L1P36222 383 aaPredicted RBP13.68□□□□□ -0.22
VARS-223ENST00000474643 LHX2P50458 406 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 GFRA1P56159 465 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 CDC73Q6P1J9 531 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 FIGNL1Q6PIW4 674 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 CPLX4Q7Z7G2 160 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 CLEC4FQ8N1N0 589 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 TRIML2Q8N7C3 387 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 PSMA8Q8TAA3 256 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 CDS1Q92903 461 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 PANX1Q96RD7 426 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 EBF4Q9BQW3 602 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 GALNT8Q9NY28 637 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 ZIM2Q9NZV7 527 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 MED11Q9P086 117 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms