RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 EMC9Q9Y3B6 208 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 SNX8Q9Y5X2 465 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 UQCRHLA0A096LP55 91 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 SHISA8B8ZZ34 492 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 C16orf97H3BN30 126 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 CTIFO43310 598 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 CGAP01215 116 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 BPGMP07738 259 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 LAMP1P11279 417 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 EFNA1P20827 205 aaPredicted RBP18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 PRPS1L1P21108 318 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 ATP6V1C1P21283 382 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 ME2P23368 584 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 UGT2B10P36537 528 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 KCNJ5P48544 419 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 RAC1P63000 192 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 LASP1Q14847 261 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 PTGR1Q14914 329 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 GUSBP1Q15486 140 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 C6orf136Q5SQH8 315 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 CDC73Q6P1J9 531 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 MTERF4Q7Z6M4 381 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 GATSQ8NAP1 163 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 ZNF527Q8NB42 609 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 B4GALNT2Q8NHY0 566 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 AENQ8WTP8 325 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 MOAP1Q96BY2 351 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 MED18Q9BUE0 208 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 ACTRT3Q9BYD9 372 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 NEUROD4Q9HD90 331 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 MED17Q9NVC6 651 aa18.29■□□□□ 0.52
PDLIM4-206ENST00000474421 SYNGR4O95473 234 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 PLGP00747 810 aaPredicted RBP18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 EIF1P41567 113 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 CCT3P49368 545 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 MAD2L1Q13257 205 aaPredicted RBP18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 PLPPR5Q32ZL2 321 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 SPDYE7PQ495Y7 208 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 PDSS1Q5T2R2 415 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 IL23RQ5VWK5 629 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 PPP4R4Q6NUP7 873 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 ESPNLQ6ZVH7 1005 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 ZAR1Q86SH2 424 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 OR10D3Q8NH80 312 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 SFXN5Q8TD22 340 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 ADAMTS15Q8TE58 950 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 CDS1Q92903 461 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 CAVIN3Q969G5 261 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 TUBGCP3Q96CW5 907 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 COQ8BQ96D53 544 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 SH3YL1Q96HL8 342 aaPredicted RBP18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 GMPPAQ96IJ6 420 aaPredicted RBP18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 C3orf30Q96M34 536 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 WFIKKN1Q96NZ8 548 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 C1orf50Q9BV19 199 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 TMEM109Q9BVC6 243 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 FANCFQ9NPI8 374 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 GLRX2Q9NS18 164 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 BEX4Q9NWD9 120 aaPredicted RBP18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 GIMAP2Q9UG22 337 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 ZDHHC2Q9UIJ5 367 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 ACANP16112 2415 aa18.28■□□□□ 0.52
PDLIM4-206ENST00000474421 H3BNH8 94 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 ADAMDEC1O15204 470 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 SKAP2O75563 359 aaPredicted RBP18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 AQP8O94778 261 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 FOSL1P15407 271 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 CTBP2P56545 445 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 TP53BP2Q13625 1128 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 CCNJQ5T5M9 372 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 WDR93Q6P2C0 686 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 BHLHB9Q6PI77 547 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 ZNF610Q8N9Z0 462 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 OR6K3Q8NGY3 331 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 PPP1R14CQ8TAE6 165 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 OTUB1Q96FW1 271 aaPredicted RBP18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 RNF145Q96MT1 663 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 ZIM3Q96PE6 472 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 BHLHE41Q9C0J9 482 aaPredicted RBP18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 FBXO34Q9NWN3 711 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 KLHL28Q9NXS3 571 aa18.27■□□□□ 0.52
PDLIM4-206ENST00000474421 TYROBPO43914 113 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 CRYGSP22914 178 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 PSMA4P25789 261 aaKnown RBP18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 ARRB2P32121 409 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 ADAM8P78325 824 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 FOXD4Q12950 439 aaPredicted RBP18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 GTF2IRD2BQ6EKJ0 949 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 GTF2IRD2Q86UP8 949 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 NUDCD3Q8IVD9 361 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 OR2V1Q8NHB1 315 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 PHOSPHO1Q8TCT1 267 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 ADGRG7Q96K78 797 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 PLSCR4Q9NRQ2 329 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 VPS13CQ709C8 3753 aa18.26■□□□□ 0.51
PDLIM4-206ENST00000474421 FLNAP21333 2647 aaKnown RBP18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 NF1P21359 2839 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 CFLARO15519 480 aa18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 SS18L1O75177 396 aaPredicted RBP18.25■□□□□ 0.51
PDLIM4-206ENST00000474421 C6orf47O95873 294 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms