RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TRPC4Q9UBN4 977 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 RCE1Q9Y256 329 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 PPIL1Q9Y3C6 166 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 GLTPD2A6NH11 291 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 FAM74A7A6NL05 159 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 PRR23D1E9PI22 279 aaPredicted RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 ABCD4O14678 606 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 SIGLEC5O15389 551 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 GSTZ1O43708 216 aaPredicted RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 ADAMTS4O75173 837 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 PRR23D2P0DMB1 279 aaPredicted RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 RAB3BP20337 219 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 PPP2R1BP30154 601 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 RAD52P43351 418 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 SMAD3P84022 425 aaKnown RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 SIGLEC14Q08ET2 396 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 FAM74A3Q4VXF1 159 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 SLC25A25Q6KCM7 469 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 PXKQ7Z7A4 578 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 FAM71CQ8NEG0 241 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 C17orf47Q8NEP4 570 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 ABHD4Q8TB40 342 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 MRPS24Q96EL2 167 aaKnown RBP17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 TMPRSS13Q9BYE2 586 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 NANSQ9NR45 359 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 MED17Q9NVC6 651 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 CLEC4EQ9ULY5 219 aa17.37■□□□□ 0.37
ECHDC1-214ENST00000474289 ARPC1BO15143 372 aaKnown RBP17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 FRS3O43559 492 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 HMGA1P17096 107 aaKnown RBP17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 PAICSP22234 425 aaKnown RBP17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 PCBP4P57723 403 aaKnown RBP17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 FAM26DQ5JW98 314 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 PIP5KL1Q5T9C9 394 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 SYT9Q86SS6 491 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 EIF4E3Q8N5X7 224 aaKnown RBP17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 EXOSC8Q96B26 276 aaKnown RBP17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 TEX12Q9BXU0 123 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 QRSL1Q9H0R6 528 aaKnown RBP17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 IL20Q9NYY1 176 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 CAMK2AQ9UQM7 478 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 OR2M5A3KFT3 312 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 PLPP1O14494 284 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 ARPC5O15511 151 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 PLPP2O43688 288 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 RB1P06400 928 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 CKBP12277 381 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 AHRP35869 848 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 GPR4P46093 362 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 CCR9P51686 369 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 RAP2BP61225 183 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 FAM69AQ5T7M9 428 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 KRT78Q8N1N4 520 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 SLC5A11Q8WWX8 675 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 OVCA2Q8WZ82 227 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 HERVK_113Q902F9 699 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 KLK6Q92876 244 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 GCDHQ92947 438 aaPredicted RBP17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 SLC38A3Q99624 504 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 MTG2Q9H4K7 406 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 EVA1AQ9H8M9 152 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 HRASLSQ9HDD0 168 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 SEMA4GQ9NTN9 838 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 NTMQ9P121 344 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 ZNF69Q9UC07 566 aa17.36■□□□□ 0.37
ECHDC1-214ENST00000474289 NUP210Q8TEM1 1887 aaPredicted RBP17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 SLC5A10A0PJK1 596 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 SC5DO75845 299 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 KDM4BO94953 1096 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 CHRM4P08173 479 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 GABRA1P14867 456 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 CPN1P15169 458 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 GNA13Q14344 377 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 NXPE4Q6UWF7 544 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 NHLRC1Q6VVB1 395 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 CXXC5Q7LFL8 322 aaKnown RBP17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 LSRQ86X29 649 aaPredicted RBP17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 UPF1Q92900 1129 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■□□□□ 8
ECHDC1-214ENST00000474289 TM4SF18Q96CE8 201 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 SLC35G5Q96KT7 338 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 IFT27Q9BW83 186 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 NPFFR2Q9Y5X5 522 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 CPSF4LA6NMK7 179 aaKnown RBP17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 CHURC1-FNTBB4DL54 471 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 D6RAR5 112 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 SDC3O75056 442 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 PBLDP30039 288 aaPredicted RBP17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 PSMA6P60900 246 aaKnown RBP17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 SEC61A1P61619 476 aaKnown RBP17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 PLBD1Q6P4A8 553 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 GLDNQ6ZMI3 551 aaPredicted RBP17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 TMUB2Q71RG4 321 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 PAQR7Q86WK9 346 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 PDZD9Q8IXQ8 264 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 MEIOBQ8N635 442 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 OR13C5Q8NGS8 318 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 PIGXQ8TBF5 258 aa17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 BCL7CQ8WUZ0 217 aaPredicted RBP17.35■□□□□ 0.37
ECHDC1-214ENST00000474289 ZDHHC6Q9H6R6 413 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms