RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CCDC120Q96HB5 630 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 ZNF317Q96PQ6 595 aaPredicted RBP12.49□□□□□ -0.41
USF1-205ENST00000473969 TRNT1Q96Q11 434 aaKnown RBP12.49□□□□□ -0.41
USF1-205ENST00000473969 PIGQQ9BRB3 760 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 UGT2B28Q9BY64 529 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 RTN4RQ9BZR6 473 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 CORO2BQ9UQ03 480 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 POLEQ07864 2286 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 SERINC4A6NH21 518 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 C17orf51A8MQB3 221 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 ZIC3O60481 467 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
USF1-205ENST00000473969 CCDC22O60826 627 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 CYP7B1O75881 506 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 H6PDO95479 791 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 UBL4AP11441 157 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 ETFAP13804 333 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 POU3F2P20265 443 aaPredicted RBP12.48□□□□□ -0.41
USF1-205ENST00000473969 CHMP24386 653 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 P2RX1P51575 399 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 CRISP3P54108 245 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 SRYQ05066 204 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 CRYZQ08257 329 aaKnown RBP12.48□□□□□ -0.41
USF1-205ENST00000473969 FADDQ13158 208 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 ZNF141Q15928 474 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 PAGE3Q5JUK9 113 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 LRIF1Q5T3J3 769 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 C1orf185Q5T7R7 199 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 CGB2Q6NT52 195 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 LRRC74BQ6ZQY2 392 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 EIF3MQ7L2H7 374 aaKnown RBP12.48□□□□□ -0.41
USF1-205ENST00000473969 MRGPRGQ86SM5 289 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 TMCO5AQ8N6Q1 288 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 TOR1AIP2Q8NFQ8 470 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 OR10Q1Q8NGQ4 319 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 RND1Q92730 232 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 PMM1Q92871 262 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 AURKBQ96GD4 344 aaPredicted RBP12.48□□□□□ -0.41
USF1-205ENST00000473969 ELAC2Q9BQ52 826 aaKnown RBP12.48□□□□□ -0.41
USF1-205ENST00000473969 FAM107BQ9H098 131 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 ZNF385DQ9H6B1 395 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 MTHFD2LQ9H903 347 aaPredicted RBP12.48□□□□□ -0.41
USF1-205ENST00000473969 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.48□□□□□ -0.41
USF1-205ENST00000473969 SLC6A13Q9NSD5 602 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 VDAC3Q9Y277 283 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 CARD8Q9Y2G2 431 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 HRH3Q9Y5N1 445 aa12.48□□□□□ -0.41
USF1-205ENST00000473969 GMNCA6NCL1 334 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 WIPF3A6NGB9 483 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 CYSRT1A8MQ03 144 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 C5orf58C9J3I9 102 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 H0Y3Z8 333 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 ZNF264O43296 627 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 KIAA0513O60268 411 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 UGT2B17O75795 530 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 CSTAP01040 98 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 PEPDP12955 493 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 ADSLP30566 484 aaPredicted RBP12.47□□□□□ -0.41
USF1-205ENST00000473969 RNF144AP50876 292 aaPredicted RBP12.47□□□□□ -0.41
USF1-205ENST00000473969 CCR4P51679 360 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 SUMO3P55854 103 aaPredicted RBP12.47□□□□□ -0.41
USF1-205ENST00000473969 EEFSECP57772 596 aaKnown RBP12.47□□□□□ -0.41
USF1-205ENST00000473969 GNGT1P63211 74 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 CHRNEQ04844 493 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 PMPCAQ10713 525 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 NFYCQ13952 458 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 RGNQ15493 299 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 CD226Q15762 336 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 SYPL1Q16563 259 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 EMC4Q5J8M3 183 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 TYW3Q6IPR3 259 aaKnown RBP12.47□□□□□ -0.41
USF1-205ENST00000473969 XKRXQ6PP77 449 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 SPATA21Q7Z572 469 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 DHDDSQ86SQ9 333 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 PEX5LQ8IYB4 626 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 ULK2Q8IYT8 1036 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 ZNF808Q8N4W9 903 aaPredicted RBP12.47□□□□□ -0.41
USF1-205ENST00000473969 MEIOBQ8N635 442 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 ANKFN1Q8N957 763 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 ZBTB8AQ96BR9 441 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 PRDM14Q9GZV8 571 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 SLC35A3Q9Y2D2 325 aa12.47□□□□□ -0.41
USF1-205ENST00000473969 NPIPB9F8W1W9 429 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 H3BML4 177 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 TNFRSF21O75509 655 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 C1QCP02747 245 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 BCHEP06276 602 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 CPN1P15169 458 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 IL7RP16871 459 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 ME2P23368 584 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 LSP1P33241 339 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 EIF1P41567 113 aaKnown RBP12.46□□□□□ -0.41
USF1-205ENST00000473969 STARP49675 285 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 SEC24CP53992 1094 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 GFRA1P56159 465 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 ZNF117Q03924 483 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 KLF10Q13118 480 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 CBFBQ13951 182 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 BCL2A1Q16548 175 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 ARSKQ6UWY0 536 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms