RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 RRM2BQ7LG56 351 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 GLRX5Q86SX6 157 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 CADM2Q8N3J6 435 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 YIPF7Q8N8F6 280 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 PFN4Q8NHR9 129 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 AP3S1Q92572 193 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 SMARCD2Q92925 531 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 AIFM2Q9BRQ8 373 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 TMEM43Q9BTV4 400 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 SARGQ9BW04 601 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 ACTRT3Q9BYD9 372 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 DPH1Q9BZG8 443 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 MKRN2Q9H000 416 aaKnown RBP10.19□□□□□ -0.78
C9orf3-214ENST00000473778 UBQLN3Q9H347 655 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 RBFOX1Q9NWB1 397 aaKnown RBP10.19□□□□□ -0.78
C9orf3-214ENST00000473778 KCNE5Q9UJ90 142 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 ZNF443Q9Y2A4 671 aaPredicted RBP10.19□□□□□ -0.78
C9orf3-214ENST00000473778 PRUNE2Q8WUY3 3088 aa10.19□□□□□ -0.78
C9orf3-214ENST00000473778 NPIPA5A0A0B4J1W7 369 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 A0A0G2JMP0 313 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 A0A0X1KG70 313 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 E9PI62 339 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 NPIPA7E9PJI5 369 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 LYRM1O43325 122 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 PLOD3O60568 738 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 KAT7O95251 611 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 ZNF888P0CJ79 500 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-214ENST00000473778 NPIPA8P0DM63 369 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 IL9P15248 144 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 MAKP20794 623 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 MAT2AP31153 395 aaKnown RBP10.18□□□□□ -0.78
C9orf3-214ENST00000473778 PTGS2P35354 604 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 IGFALSP35858 605 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 NUDT1P36639 197 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 ACSM1Q08AH1 577 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 RPE65Q16518 533 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 DUSP5Q16690 384 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 VITQ6UXI7 678 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 FAM109AQ8N4B1 249 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 TMEM99Q8N816 258 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 OR4M2Q8NGB6 313 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 GANCQ8TET4 914 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 OSTF1Q92882 214 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 KISS1RQ969F8 398 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-214ENST00000473778 STON1Q9Y6Q2 735 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-214ENST00000473778 C12orf71A8MTZ7 269 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 P2RX6O15547 441 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 AKAP8O43823 692 aaKnown RBP10.18□□□□□ -0.78
C9orf3-214ENST00000473778 HLA-DPB1P04440 258 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 CPN2P22792 545 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 IFNGR2P38484 337 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 STAT5AP42229 794 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 OR3A3P47888 321 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 RAB25P57735 213 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 ABATP80404 500 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 ID2Q02363 134 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 KRT33BQ14525 404 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 PDGFRLQ15198 375 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 QPRTQ15274 297 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 TRMT12Q53H54 448 aaKnown RBP10.18□□□□□ -0.78
C9orf3-214ENST00000473778 PLET1Q6UQ28 207 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 THSD4Q6ZMP0 1018 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 UBE2Q1Q7Z7E8 422 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 TMEFF1Q8IYR6 380 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 KLHL36Q8N4N3 616 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 MFSD9Q8NBP5 474 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 DUSP18Q8NEJ0 188 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 OR2T33Q8NG76 320 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 OR4E2Q8NGC2 313 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 MOAP1Q96BY2 351 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 ZC3HAV1LQ96H79 300 aaKnown RBP10.18□□□□□ -0.78
C9orf3-214ENST00000473778 PLA2G2FQ9BZM2 168 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 ANKRD19PQ9H560 264 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 FGF22Q9HCT0 170 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 RPRD1BQ9NQG5 326 aaKnown RBP10.18□□□□□ -0.78
C9orf3-214ENST00000473778 FBXL4Q9UKA2 621 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 SLC13A4Q9UKG4 626 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 SLC17A4Q9Y2C5 497 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 CDH10Q9Y6N8 788 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 LAMA1P25391 3075 aa10.18□□□□□ -0.78
C9orf3-214ENST00000473778 F5P12259 2224 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 IRGMA1A4Y4 181 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 OR6C70A6NIJ9 312 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 GTPBP1O00178 669 aaKnown RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 HCN1O60741 890 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 PAHP00439 452 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 CLUP10909 449 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 NDUFV2P19404 249 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 SDHBP21912 280 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 OR10A3P58181 314 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 EEF1A1P68104 462 aaKnown RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 GPLD1P80108 840 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 SIM1P81133 766 aaPredicted RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 FCRLBQ6BAA4 426 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 PSRC1Q6PGN9 363 aaPredicted RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 CXXC5Q7LFL8 322 aaKnown RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 RAB42Q8N4Z0 105 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 OR52N1Q8NH53 320 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 ADAMTS15Q8TE58 950 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms