RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 SLIRPQ9GZT3 109 aaKnown RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 SLC22A11Q9NSA0 550 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 THUMPD1Q9NXG2 353 aaKnown RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 AKAP7Q9P0M2 348 aaPredicted RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.74□□□□□ -0.21
LMNA-213ENST00000473598 SAMD4AQ9UPU9 718 aaKnown RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 MAGED1Q9Y5V3 778 aaPredicted RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 A3GALT2U3KPV4 340 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 NCOR2Q9Y618 2525 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 B4E171 279 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 TBX1O43435 398 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 PLOD3O60568 738 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 SNX4O95219 450 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 HPRP00739 348 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 CT62P0C5K7 136 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 TSPAN7P41732 249 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 MAGEA2P43356 314 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 KHKP50053 298 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 DCDP81605 110 aaKnown RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 CDK6Q00534 326 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 EEF1A2Q05639 463 aaKnown RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 MAP4K2Q12851 820 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 SERTAD2Q14140 314 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 ZNF385CQ66K41 422 aaPredicted RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 DGAT2L6Q6ZPD8 337 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 GDPD3Q7L5L3 318 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 HDDC2Q7Z4H3 204 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 THAP5Q7Z6K1 395 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 STK32CQ86UX6 486 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 LIX1LQ8IVB5 337 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 SVOPLQ8N434 492 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 NFKBIDQ8NI38 313 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 NDNFQ8TB73 568 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 RAB8BQ92930 207 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 PTCHD1Q96NR3 888 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 DGAT2Q96PD7 388 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 MS4A4EQ96PG1 132 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 STRADBQ9C0K7 418 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 TGIF2Q9GZN2 237 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 MMP27Q9H306 513 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 A4GALTQ9NPC4 353 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 C19orf53Q9UNZ5 99 aaPredicted RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 FRYQ5TBA9 3013 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 IGLV3-12A0A075B6K2 115 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 HMX3A6NHT5 357 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 ONECUT2O95948 504 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 OR12D1P0DN82 309 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 DBTP11182 482 aaKnown RBP13.73□□□□□ -0.21
LMNA-213ENST00000473598 ICAM2P13598 275 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 KDELR2P33947 212 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 RORAP35398 523 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 ANXA11P50995 505 aaKnown RBP13.73□□□□□ -0.21
LMNA-213ENST00000473598 ISXQ2M1V0 245 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 MINDY4Q4G0A6 757 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 NKAIN1Q4KMZ8 207 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 TOR2AQ5JU69 321 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 SLC30A8Q8IWU4 369 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 OR5D16Q8NGK9 328 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 RIT1Q92963 219 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 C16orf58Q96GQ5 468 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 YIPF4Q9BSR8 244 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 PLSCR3Q9NRY6 295 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 EIF3KQ9UBQ5 218 aaKnown RBP13.73□□□□□ -0.21
LMNA-213ENST00000473598 BOLA1Q9Y3E2 137 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 PCDHGB1Q9Y5G3 927 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 IGKV3D-11A0A0A0MRZ8 115 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 AGAP5A6NIR3 686 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 H0YC42 278 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 GNGT2O14610 69 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 CPNE3O75131 537 aaKnown RBP13.73□□□□□ -0.21
LMNA-213ENST00000473598 ZNF254O75437 659 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 IL7P13232 177 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 SPINK2P20155 84 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 GALNSP34059 522 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 TPD52P55327 224 aaPredicted RBP13.73□□□□□ -0.21
LMNA-213ENST00000473598 RHAGQ02094 409 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 SNTA1Q13424 505 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 CLVS2Q5SYC1 327 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 TMEM236Q5W0B7 351 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 LGI4Q8N135 537 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 VWA5B2Q8N398 1253 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 C7orf57Q8NEG2 295 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 OR10Q1Q8NGQ4 319 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 MCFD2Q8NI22 146 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 DOK4Q8TEW6 326 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 SLC38A5Q8WUX1 472 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 RDH12Q96NR8 316 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 PELOQ9BRX2 385 aaKnown RBP13.73□□□□□ -0.21
LMNA-213ENST00000473598 ACTRT3Q9BYD9 372 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 SOX17Q9H6I2 414 aaPredicted RBP13.73□□□□□ -0.21
LMNA-213ENST00000473598 EQTNQ9NQ60 294 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 SLC39A1Q9NY26 324 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 B3GNT2Q9NY97 397 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 CTSFQ9UBX1 484 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 OSGIN1Q9UJX0 560 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 LOXL2Q9Y4K0 774 aa13.73□□□□□ -0.21
LMNA-213ENST00000473598 CELSR3Q9NYQ7 3312 aa13.72□□□□□ -0.21
LMNA-213ENST00000473598 LEUTXA8MZ59 168 aa13.72□□□□□ -0.21
LMNA-213ENST00000473598 ZNF780AO75290 641 aaPredicted RBP13.72□□□□□ -0.21
LMNA-213ENST00000473598 GCM2O75603 506 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms