RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 PNPT1Q8TCS8 783 aaKnown RBP16.4■□□□□ 0.22
SNX4-204ENST00000473417 RAB8BQ92930 207 aa16.4■□□□□ 0.22
SNX4-204ENST00000473417 SPDL1Q96EA4 605 aa16.4■□□□□ 0.22
SNX4-204ENST00000473417 TBL1XR1Q9BZK7 514 aa16.4■□□□□ 0.22
SNX4-204ENST00000473417 RTN4RQ9BZR6 473 aa16.4■□□□□ 0.22
SNX4-204ENST00000473417 PRDM14Q9GZV8 571 aa16.4■□□□□ 0.22
SNX4-204ENST00000473417 RABEP2Q9H5N1 569 aa16.4■□□□□ 0.22
SNX4-204ENST00000473417 ZNF385DQ9H6B1 395 aa16.4■□□□□ 0.22
SNX4-204ENST00000473417 SLC6A13Q9NSD5 602 aa16.4■□□□□ 0.22
SNX4-204ENST00000473417 ABCG2Q9UNQ0 655 aa16.4■□□□□ 0.22
SNX4-204ENST00000473417 DUXAA6NLW8 204 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 SLC25A35Q3KQZ1 300 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 ACSF3Q4G176 576 aaPredicted RBP16.39■□□□□ 0.21
SNX4-204ENST00000473417 NHSL2Q5HYW2 709 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 APOOLQ6UXV4 268 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 PLCZ1Q86YW0 608 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 MIPOL1Q8TD10 442 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 XAGE5Q8WWM1 108 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 GTF2H4Q92759 462 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 TIMP4Q99727 224 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 PPP4R1LQ9P1A2 415 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 KLHL14Q9P2G3 628 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 KCNN3Q9UGI6 736 aa16.39■□□□□ 0.21
SNX4-204ENST00000473417 NPIPA5A0A0B4J1W7 369 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 NPIPA7E9PJI5 369 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 CBR3O75828 277 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 OXSR1O95747 527 aaPredicted RBP16.38■□□□□ 0.21
SNX4-204ENST00000473417 ANGPTL1O95841 491 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 NPIPA8P0DM63 369 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 HPGDP15428 266 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 TBXA2RP21731 343 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 KHKP50053 298 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 EIPR1Q53HC9 387 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 VASNQ6EMK4 673 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 OLIG3Q7RTU3 272 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 C16orf62Q7Z3J2 963 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 GATSQ8NAP1 163 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 ZFP90Q8TF47 636 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 DUSP19Q8WTR2 217 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 SDF2Q99470 211 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 SLC52A3Q9NQ40 469 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 SDHAF3Q9NRP4 125 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 UBQLN4Q9NRR5 601 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 EXD2Q9NVH0 621 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 TMEM45AQ9NWC5 275 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 FBXL2Q9UKC9 423 aa16.38■□□□□ 0.21
SNX4-204ENST00000473417 AHRRA9YTQ3 701 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 KDM4EB2RXH2 506 aaPredicted RBP16.37■□□□□ 0.21
SNX4-204ENST00000473417 KRT75O95678 551 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 EPPINO95925 133 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 ZCCHC18P0CG32 403 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 LCN1P31025 176 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 SEC24CP53992 1094 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 DLX5P56178 289 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 FLYWCH1Q4VC44 716 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 PAGE3Q5JUK9 113 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 WIPI1Q5MNZ9 446 aaPredicted RBP16.37■□□□□ 0.21
SNX4-204ENST00000473417 COX20Q5RI15 118 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 ATAD3BQ5T9A4 648 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 YRDCQ86U90 279 aaKnown RBP16.37■□□□□ 0.21
SNX4-204ENST00000473417 CDH24Q86UP0 819 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 LACC1Q8IV20 430 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 PM20D2Q8IYS1 436 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 NAXEQ8NCW5 288 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 CHDHQ8NE62 594 aaPredicted RBP16.37■□□□□ 0.21
SNX4-204ENST00000473417 OR4K17Q8NGC6 315 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 AURKBQ96GD4 344 aaPredicted RBP16.37■□□□□ 0.21
SNX4-204ENST00000473417 PAIP1Q9H074 479 aaKnown RBP16.37■□□□□ 0.21
SNX4-204ENST00000473417 DSN1Q9H410 356 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 TPT1P8Q9HAU6 139 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 SLC24A3Q9HC58 644 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 MED11Q9P086 117 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 SLC6A5Q9Y345 797 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 PCDHB14Q9Y5E9 798 aa16.37■□□□□ 0.21
SNX4-204ENST00000473417 MED12LQ86YW9 2145 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 HSPB2A8KAH6 182 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 B4DXG7 233 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 ALG1L2C9J202 215 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 HMGN4O00479 90 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 SCDO00767 359 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 NDUFB5O43674 189 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 GMFGO60234 142 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 FCMRO60667 390 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 AGR2O95994 175 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 AK1P00568 194 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 NGFRP08138 427 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 CEACAM8P31997 349 aaPredicted RBP16.36■□□□□ 0.21
SNX4-204ENST00000473417 RNF144AP50876 292 aaPredicted RBP16.36■□□□□ 0.21
SNX4-204ENST00000473417 GPR68Q15743 365 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 HSPB2Q16082 182 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 ARHGAP11BQ3KRB8 267 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 DCST1Q5T197 706 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNX4-204ENST00000473417 RELL2Q8NC24 303 aaPredicted RBP16.36■□□□□ 0.21
SNX4-204ENST00000473417 FAM83FQ8NEG4 500 aaPredicted RBP16.36■□□□□ 0.21
SNX4-204ENST00000473417 ZNF559Q9BR84 538 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 UGT2B28Q9BY64 529 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 SLAMF8Q9P0V8 285 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 ITGB1BP2Q9UKP3 347 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 L3MBTL1Q9Y468 752 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms