RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 NUFIP2Q7Z417 695 aaKnown RBP16.89■□□□□ 0.29
RHBDF1-207ENST00000472390 GTPBP8Q8N3Z3 284 aaPredicted RBP16.89■□□□□ 0.29
RHBDF1-207ENST00000472390 HOXB13Q92826 284 aaPredicted RBP16.89■□□□□ 0.29
RHBDF1-207ENST00000472390 GMPPAQ96IJ6 420 aaPredicted RBP16.89■□□□□ 0.29
RHBDF1-207ENST00000472390 TXLNGYQ9BZA5 131 aa16.89■□□□□ 0.29
RHBDF1-207ENST00000472390 LRTM1Q9HBL6 345 aa16.89■□□□□ 0.29
RHBDF1-207ENST00000472390 MRTO4Q9UKD2 239 aaKnown RBP16.89■□□□□ 0.29
RHBDF1-207ENST00000472390 FAM171A2A8MVW0 826 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 NPIPB8E9PQR5 432 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 LINC01387J3KSC0 135 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 PLIN3O60664 434 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 SLITRK5O94991 958 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 GSTA1P08263 222 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 ZNF17P17021 662 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 ATP5J2P56134 94 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 TNK1Q13470 666 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 HBMQ6B0K9 141 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 Q6ZSR9 355 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 IKBIPQ70UQ0 350 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 TRMT10CQ7L0Y3 403 aaKnown RBP16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 LILRB1Q8NHL6 650 aaPredicted RBP16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 ACMSDQ8TDX5 336 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 TMEM171Q8WVE6 324 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 JADE3Q92613 823 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 AKAP1Q92667 903 aaKnown RBP eCLIP16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 CAVIN3Q969G5 261 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 S100PBPQ96BU1 408 aa16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 RRAGDQ9NQL2 400 aaPredicted RBP16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 MCTS1Q9ULC4 181 aaKnown RBP16.88■□□□□ 0.29
RHBDF1-207ENST00000472390 STAB1Q9NY15 2570 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 IGHV3-15A0A0B4J1V0 119 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 HS3ST1O14792 307 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 GLRA3O75311 464 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 SYNGR4O95473 234 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 EDNRAP25101 427 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 PSMD4P55036 377 aaKnown RBP16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 ZNF117Q03924 483 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 FGFBP1Q14512 234 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 TOMM34Q15785 309 aaPredicted RBP16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 LCA5Q86VQ0 697 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 WDR75Q8IWA0 830 aaKnown RBP16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 COX18Q8N8Q8 333 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 FAM110BQ8TC76 370 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 CDS1Q92903 461 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 PPCDCQ96CD2 204 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 FCRL1Q96LA6 429 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 MS4A4EQ96PG1 132 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 RHOXF2Q9BQY4 288 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 TMEM204Q9BSN7 226 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 C3orf14Q9HBI5 128 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 SIRT3Q9NTG7 399 aaPredicted RBP16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 C1orf109Q9NX04 203 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 SH3BP4Q9P0V3 963 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 LAMP3Q9UQV4 416 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 KCNE3Q9Y6H6 103 aa16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 CHD3Q12873 2000 aaKnown RBP16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 NUP214P35658 2090 aaPredicted RBP16.87■□□□□ 0.29
RHBDF1-207ENST00000472390 ADAMDEC1O15204 470 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 CLOCKO15516 846 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 SOD3P08294 240 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 LINC00032P0C843 101 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 UROSP10746 265 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 CDKN1AP38936 164 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 ZNF41P51814 821 aaPredicted RBP16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 GALNTL6Q49A17 601 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 RFTN2Q52LD8 501 aaPredicted RBP16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 CFAP157Q5JU67 520 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 CBLN3Q6UW01 205 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 OLIG3Q7RTU3 272 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 CDRT4Q8N9R6 151 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 CCDC63Q8NA47 563 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 ATP6V1C2Q8NEY4 427 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 FAM76AQ8TAV0 307 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 OSTF1Q92882 214 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 CHMP6Q96FZ7 201 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 KLHL15Q96M94 604 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 REEP4Q9H6H4 257 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 COQ10BQ9H8M1 238 aa16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 ZNF701Q9NV72 531 aaPredicted RBP16.86■□□□□ 0.29
RHBDF1-207ENST00000472390 ABCA1O95477 2261 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 RNF223E7ERA6 249 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 NDUFS7O75251 213 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 GCM2O75603 506 aaPredicted RBP16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 LINGO3P0C6S8 592 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 PTNP21246 168 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 FRKP42685 505 aaPredicted RBP16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 MANFP55145 182 aaKnown RBP16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 RAC1P63000 192 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 PPP2R2BQ00005 443 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 PDE7AQ13946 482 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 ZNF239Q16600 458 aaKnown RBP16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 EXOSC6Q5RKV6 272 aaKnown RBP16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 CPTPQ5TA50 214 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 TFAP2EQ6VUC0 442 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 C10orf107Q8IVU9 208 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 TUSC5Q8IXB3 177 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 LILRA2Q8N149 483 aa16.85■□□□□ 0.29
RHBDF1-207ENST00000472390 C4orf33Q8N1A6 199 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms