RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 H6PDO95479 791 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 NPIPA8P0DM63 369 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 CD1EP15812 388 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 HK1P19367 917 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 ACVR2AP27037 513 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 PTGER4P35408 488 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 ADH7P40394 386 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 GFRA1P56159 465 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 DSTNP60981 165 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 SF3A3Q12874 501 aaKnown RBP eCLIP13.87□□□□□ -0.19
SDC3-203ENST00000471567 SF3B4Q15427 424 aaKnown RBP eCLIP13.87□□□□□ -0.19
SDC3-203ENST00000471567 RGNQ15493 299 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 GPAT3Q53EU6 434 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 AAGABQ6PD74 315 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 ENPP6Q6UWR7 440 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 RPTNQ6XPR3 784 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 FRRS1Q6ZNA5 592 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 MSRB3Q8IXL7 192 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 ZNF619Q8N2I2 560 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 GATSQ8NAP1 163 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 OR5M9Q8NGP3 310 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 B4GALNT2Q8NHY0 566 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 PHOSPHO1Q8TCT1 267 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 CCDC120Q96HB5 630 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 PRDM14Q9GZV8 571 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 NSRP1Q9H0G5 558 aaKnown RBP13.87□□□□□ -0.19
SDC3-203ENST00000471567 CALML5Q9NZT1 146 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 SLAMF8Q9P0V8 285 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 P2RX2Q9UBL9 471 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 TNFRSF10DQ9UBN6 386 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 CORO2BQ9UQ03 480 aa13.87□□□□□ -0.19
SDC3-203ENST00000471567 DIDO1Q9BTC0 2240 aaKnown RBP13.86□□□□□ -0.19
SDC3-203ENST00000471567 GMNCA6NCL1 334 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 TMEM247A6NEH6 219 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 SERINC4A6NH21 518 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 GTPBP1O00178 669 aaKnown RBP13.86□□□□□ -0.19
SDC3-203ENST00000471567 HCRTR2O43614 444 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 EIF4E2O60573 245 aaKnown RBP13.86□□□□□ -0.19
SDC3-203ENST00000471567 UGT2B17O75795 530 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 TFPTP0C1Z6 253 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 NR2F1P10589 423 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 BMP2P12643 396 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 ETFAP13804 333 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 CPN1P15169 458 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 LSP1P33241 339 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 SEC24CP53992 1094 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 SUMO3P55854 103 aaPredicted RBP13.86□□□□□ -0.19
SDC3-203ENST00000471567 B3GALT5-AS1P59052 145 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 CHRNEQ04844 493 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 KLF10Q13118 480 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 GNA13Q14344 377 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 MAPRE2Q15555 327 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 SYPL1Q16563 259 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 PDZK1Q5T2W1 519 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 ZNF585AQ6P3V2 769 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 DLEU7Q6UYE1 221 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 ZNF614Q8N883 585 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 ANKFN1Q8N957 763 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 TOR1AIP2Q8NFQ8 470 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 WDYHV1Q96HA8 205 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 SFXN2Q96NB2 322 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 PIGQQ9BRB3 760 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 SLC38A1Q9H2H9 487 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 MTHFD2LQ9H903 347 aaPredicted RBP13.86□□□□□ -0.19
SDC3-203ENST00000471567 VAPAQ9P0L0 249 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 KCNE5Q9UJ90 142 aa13.86□□□□□ -0.19
SDC3-203ENST00000471567 EVPLLA8MZ36 301 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 FAM47E-STBD1D6RA91 191 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 ZNF264O43296 627 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 CCDC22O60826 627 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 ZG16O60844 167 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 TNFRSF21O75509 655 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 CHRM4P08173 479 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 UBL4AP11441 157 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 AGAP20933 346 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 P2RX1P51575 399 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 SMSP52788 366 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 ZNF117Q03924 483 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 BCL2A1Q16548 175 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 TMEM44Q2T9K0 475 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 COQ5Q5HYK3 327 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 C3P1Q6ZMU1 363 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 EIF3MQ7L2H7 374 aaKnown RBP13.85□□□□□ -0.19
SDC3-203ENST00000471567 OLIG3Q7RTU3 272 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 SPATA21Q7Z572 469 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 RETREG3Q86VR2 466 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 ULK2Q8IYT8 1036 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 ZBTB8AQ96BR9 441 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 SH3YL1Q96HL8 342 aaPredicted RBP13.85□□□□□ -0.19
SDC3-203ENST00000471567 ELAC2Q9BQ52 826 aaKnown RBP13.85□□□□□ -0.19
SDC3-203ENST00000471567 LAT2Q9GZY6 243 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.85□□□□□ -0.19
SDC3-203ENST00000471567 ALKBH4Q9NXW9 302 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.85□□□□□ -0.19
SDC3-203ENST00000471567 ICAM5Q9UMF0 924 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 SLC35A3Q9Y2D2 325 aa13.85□□□□□ -0.19
SDC3-203ENST00000471567 RPH3AQ9Y2J0 694 aaPredicted RBP13.85□□□□□ -0.19
SDC3-203ENST00000471567 C7orf72A4D263 438 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 AGAP5A6NIR3 686 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 BBIP1A8MTZ0 92 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms