RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ARL13AQ5H913 290 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-211ENST00000471260 OR5M10Q6IEU7 315 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 ZCCHC12Q6PEW1 402 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 C16orf89Q6UX73 402 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 SPNS3Q6ZMD2 512 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 MAVSQ7Z434 540 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 DDIASQ8IXT1 998 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 NATD1Q8N6N6 113 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 CDRT4Q8N9R6 151 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 OR2M3Q8NG83 312 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 FAM222BQ8WU58 562 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 TWIST2Q8WVJ9 160 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 GFM2Q969S9 779 aaKnown RBP12.23□□□□□ -0.45
HMGN1-211ENST00000471260 PPP3R2Q96LZ3 170 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 TCF7L2Q9NQB0 619 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 SH3BP4Q9P0V3 963 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 SCOCQ9UIL1 159 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 ITGB1BP2Q9UKP3 347 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 EDARQ9UNE0 448 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 FIS1Q9Y3D6 152 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 PTGDR2Q9Y5Y4 395 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 DOCK7Q96N67 2140 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 MED12Q93074 2177 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 CLCA1A8K7I4 914 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 CASQ2O14958 399 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-211ENST00000471260 SOX30O94993 753 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 NKX2-2O95096 273 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 CRHP06850 196 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 CHRNGP07510 517 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 POU3F2P20265 443 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-211ENST00000471260 LCN1P31025 176 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 GABRA3P34903 492 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 GPC1P35052 558 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 CPA2P48052 419 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 SH3BGRP55822 239 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-211ENST00000471260 CLDN18P56856 261 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 IRX1P78414 480 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-211ENST00000471260 PRR5P85299 388 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 SRYQ05066 204 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 FLYWCH1Q4VC44 716 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 ZNF551Q7Z340 670 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-211ENST00000471260 DHDDSQ86SQ9 333 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 ZZZ3Q8IYH5 903 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 C9orf106Q8NAJ2 232 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 NUP43Q8NFH3 380 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 NINJ1Q92982 152 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 TSSK3Q96PN8 268 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 FAM192AQ9GZU8 254 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 PIGMQ9H3S5 423 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 DSN1Q9H410 356 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 S100A14Q9HCY8 104 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 CLCF1Q9UBD9 225 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 CCDC168Q8NDH2 2452 aa12.22□□□□□ -0.45
HMGN1-211ENST00000471260 IGLV3-32A0A0A0MS00 114 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 TUBAL3A6NHL2 446 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 TRPC5OSA6NMA1 111 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 PIP5K1BO14986 540 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 AKAP10O43572 662 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 HCRTR2O43614 444 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 SCO2O43819 266 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 NGFRP08138 427 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 BCKDHAP12694 445 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 COX4I1P13073 169 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 STARP49675 285 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 RPL14P50914 215 aaKnown RBP12.21□□□□□ -0.45
HMGN1-211ENST00000471260 SESN3P58005 492 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 B3GALT5-AS1P59052 145 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 KLF10Q13118 480 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 DAZAP2Q15038 168 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-211ENST00000471260 ATP6AP1LQ52LC2 224 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 ZNF385BQ569K4 471 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 XKR7Q5GH72 579 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 OR2A2Q6IF42 318 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 ZFP1Q6P2D0 407 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 CHMP1BQ7LBR1 199 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 MEIOBQ8N635 442 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 RP9Q8TA86 221 aaKnown RBP12.21□□□□□ -0.45
HMGN1-211ENST00000471260 DUSP19Q8WTR2 217 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 CIDECQ96AQ7 238 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-211ENST00000471260 MS4A4EQ96PG1 132 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 PIGQQ9BRB3 760 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 G6PC3Q9BUM1 346 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 TBL1XR1Q9BZK7 514 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 ZNF385DQ9H6B1 395 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 RASSF1Q9NS23 344 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 DNAJB12Q9NXW2 375 aaKnown RBP12.21□□□□□ -0.45
HMGN1-211ENST00000471260 CRIM1Q9NZV1 1036 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 ATP6V1HQ9UI12 483 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 RPH3AQ9Y2J0 694 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-211ENST00000471260 OTOGQ6ZRI0 2925 aa12.21□□□□□ -0.45
HMGN1-211ENST00000471260 SPG11Q96JI7 2443 aa12.21□□□□□ -0.46
HMGN1-211ENST00000471260 POLQO75417 2590 aa12.21□□□□□ -0.46
HMGN1-211ENST00000471260 ANKHD1Q8IWZ3 2542 aaKnown RBP12.2□□□□□ -0.46
HMGN1-211ENST00000471260 AKAP9Q99996 3911 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 B4DXG7 233 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 EEF1E1-BLOC1S5C9J1V9 151 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 ALG1L2C9J202 215 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 EEF1E1O43324 174 aaKnown RBP12.2□□□□□ -0.46
HMGN1-211ENST00000471260 EMC8O43402 210 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms