RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 SOX3P41225 446 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 YAP1P46937 504 aaKnown RBP8.97□□□□□ -0.97
CCM2-204ENST00000470837 SLC6A8P48029 635 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 PTDSS1P48651 473 aaKnown RBP8.97□□□□□ -0.97
CCM2-204ENST00000470837 CDH12P55289 794 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 FBXW4P57775 412 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 OC90Q02509 493 aaPredicted RBP8.97□□□□□ -0.97
CCM2-204ENST00000470837 MAPK14Q16539 360 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 NRF1Q16656 503 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 LRRC36Q1X8D7 754 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 CRTC2Q53ET0 693 aaPredicted RBP8.97□□□□□ -0.97
CCM2-204ENST00000470837 FGD3Q5JSP0 725 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 COLEC12Q5KU26 742 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 ACER2Q5QJU3 275 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 AGAP7PQ5VUJ5 663 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 BROXQ5VW32 411 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 FCRLBQ6BAA4 426 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 IL20RBQ6UXL0 311 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 ZBTB49Q6ZSB9 765 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 HIPK1Q86Z02 1210 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 GRAMD2AQ8IUY3 354 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 CLIP4Q8N3C7 705 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 GATSQ8NAP1 163 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 OR6T1Q8NGN1 323 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 SNIP1Q8TAD8 396 aaKnown RBP8.97□□□□□ -0.97
CCM2-204ENST00000470837 DTNBP1Q96EV8 351 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 C7orf34Q96L11 122 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 SGCZQ96LD1 299 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 PRRC1Q96M27 445 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 AGAP4Q96P64 663 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 SECISBP2Q96T21 854 aaKnown RBP8.97□□□□□ -0.97
CCM2-204ENST00000470837 MCHR1Q99705 422 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 ZNF559Q9BR84 538 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 AMBRA1Q9C0C7 1298 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 KLHL4Q9C0H6 718 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 POLR2J2Q9GZM3 115 aaKnown RBP8.97□□□□□ -0.97
CCM2-204ENST00000470837 POLR2J3Q9H1A7 115 aaKnown RBP8.97□□□□□ -0.97
CCM2-204ENST00000470837 CCDC86Q9H6F5 360 aaKnown RBP8.97□□□□□ -0.97
CCM2-204ENST00000470837 KRCC1Q9NPI7 259 aaPredicted RBP8.97□□□□□ -0.97
CCM2-204ENST00000470837 STMN3Q9NZ72 180 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 KIF17Q9P2E2 1029 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 RIMS3Q9UJD0 308 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 TESMINQ9Y4I5 508 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 ORC6Q9Y5N6 252 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 SCN2AQ99250 2005 aa8.97□□□□□ -0.97
CCM2-204ENST00000470837 TMEM200CA6NKL6 621 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 CLDN24A6NM45 220 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 CPSF4LA6NMK7 179 aaKnown RBP8.96□□□□□ -0.98
CCM2-204ENST00000470837 NPIPB9F8W1W9 429 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 CDK2AP1O14519 115 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 NKX2-8O15522 239 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 EIF4E2O60573 245 aaKnown RBP8.96□□□□□ -0.98
CCM2-204ENST00000470837 FMO6PO60774 539 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 DIRAS1O95057 198 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 NADKO95544 446 aaPredicted RBP8.96□□□□□ -0.98
CCM2-204ENST00000470837 ANGPTL1O95841 491 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 P04436 131 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 LINGO3P0C6S8 592 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 FPR1P21462 350 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 RYKP34925 604 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 ADH7P40394 386 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 CYB561P49447 251 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 RNF144AP50876 292 aaPredicted RBP8.96□□□□□ -0.98
CCM2-204ENST00000470837 C17orf67Q0P5P2 114 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 ST3GAL3Q11203 375 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 CDC20Q12834 499 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 FOXD4Q12950 439 aaPredicted RBP8.96□□□□□ -0.98
CCM2-204ENST00000470837 GANABQ14697 944 aaKnown RBP8.96□□□□□ -0.98
CCM2-204ENST00000470837 NTRK2Q16620 822 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 LRRC69Q6ZNQ3 347 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 RTL4Q6ZR62 310 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 MARCH3Q86UD3 253 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 LILRA2Q8N149 483 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 GALNT16Q8N428 558 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 TOR1AIP2Q8NFQ8 470 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 OR52J3Q8NH60 311 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 OR5K1Q8NHB7 308 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 ZNF563Q8TA94 476 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 CNOT9Q92600 299 aaKnown RBP8.96□□□□□ -0.98
CCM2-204ENST00000470837 EPYCQ99645 322 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 CIB1Q99828 191 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 UTP23Q9BRU9 249 aaKnown RBP8.96□□□□□ -0.98
CCM2-204ENST00000470837 OSBPL10Q9BXB5 764 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 TRIM2Q9C040 744 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 LAT2Q9GZY6 243 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 ING2Q9H160 280 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 EXOSC3Q9NQT5 275 aaKnown RBP8.96□□□□□ -0.98
CCM2-204ENST00000470837 DNAJB12Q9NXW2 375 aaKnown RBP8.96□□□□□ -0.98
CCM2-204ENST00000470837 CNIH4Q9P003 139 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 PPP4R1LQ9P1A2 415 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 KCNE5Q9UJ90 142 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 U3KQV3 271 aa8.96□□□□□ -0.98
CCM2-204ENST00000470837 FER1L5A0AVI2 2057 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 SDK2Q58EX2 2172 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 CENPVL1A0A0U1RR11 272 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 TRAPPC13A5PLN9 417 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 A6NL46 340 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 TMEM229AB2RXF0 380 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 MASP2O00187 686 aa8.95□□□□□ -0.98
CCM2-204ENST00000470837 CASQ2O14958 399 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms