RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 CD226Q15762 336 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 ARHGAP11BQ3KRB8 267 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 FLYWCH1Q4VC44 716 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.79□□□□□ -0.36
TOP3B-215ENST00000470338 HEPHL1Q6MZM0 1159 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 POMZP3Q6PJE2 187 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 ARSKQ6UWY0 536 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 GATSQ8NAP1 163 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 ZNF527Q8NB42 609 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 NAXEQ8NCW5 288 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 MARK4Q96L34 752 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 MAGEB18Q96M61 343 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 PANX1Q96RD7 426 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 TRIB1Q96RU8 372 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 SPOCK3Q9BQ16 436 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 TREX2Q9BQ50 279 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-215ENST00000470338 PIGQQ9BRB3 760 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 SLC35A5Q9BS91 424 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 INPP5KQ9BT40 448 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 ZNF337Q9Y3M9 751 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 A0A087WZY1 265 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 CCDC154A6NI56 674 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 FAM90A27PA6NNH2 459 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 H0Y3Z8 333 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 FCMRO60667 390 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 STX11O75558 287 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 AGR2O95994 175 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 OR12D1P0DN82 309 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 COX6B1P14854 86 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 IGFBP2P18065 325 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 CDKN2CP42773 168 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 IDH3AP50213 366 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 CASP9P55211 416 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 CLDN15P56746 228 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 SLC25A35Q3KQZ1 300 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 RAET1LQ5VY80 246 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 TRIML2Q8N7C3 387 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 EBF4Q9BQW3 602 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 CCDC28BQ9BUN5 200 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 NMUR2Q9GZQ4 415 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 RUBCNLQ9H714 662 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 TCF7L2Q9NQB0 619 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 NPDC1Q9NQX5 325 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-215ENST00000470338 EXD2Q9NVH0 621 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 ZNF446Q9NWS9 450 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 CLCF1Q9UBD9 225 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 ZNF629Q9UEG4 869 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-215ENST00000470338 DTNAQ9Y4J8 743 aa12.78□□□□□ -0.36
TOP3B-215ENST00000470338 LRBAP50851 2863 aa12.77□□□□□ -0.36
TOP3B-215ENST00000470338 NPIPA5A0A0B4J1W7 369 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 C7orf72A4D263 438 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 CLCA1A8K7I4 914 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 NPIPA7E9PJI5 369 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 POLR3GO15318 223 aaPredicted RBP12.77□□□□□ -0.37
TOP3B-215ENST00000470338 HCRTR2O43614 444 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 GMFGO60234 142 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 C1QCP02747 245 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 NPIPA8P0DM63 369 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF17P17021 662 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 CHI3L1P36222 383 aaPredicted RBP12.77□□□□□ -0.37
TOP3B-215ENST00000470338 POLR2JP52435 117 aaKnown RBP12.77□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF136P52737 540 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 SUCLG1P53597 346 aaKnown RBP12.77□□□□□ -0.37
TOP3B-215ENST00000470338 TXNL4AP83876 142 aaKnown RBP12.77□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF117Q03924 483 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF141Q15928 474 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 TNFAIP8L2Q6P589 184 aaPredicted RBP12.77□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF621Q6ZSS3 439 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 MSANTD1Q6ZTZ1 278 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 MIER2Q8N344 545 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 GTPBP8Q8N3Z3 284 aaPredicted RBP12.77□□□□□ -0.37
TOP3B-215ENST00000470338 C9orf106Q8NAJ2 232 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 OR5M1Q8NGP8 315 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 B4GALNT2Q8NHY0 566 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 PHOSPHO1Q8TCT1 267 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 XAGE5Q8WWM1 108 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 RAB8BQ92930 207 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 WNT2BQ93097 391 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 ZBTB8AQ96BR9 441 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 SH3YL1Q96HL8 342 aaPredicted RBP12.77□□□□□ -0.37
TOP3B-215ENST00000470338 KLHDC3Q9BQ90 382 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF350Q9GZX5 532 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 SAP130Q9H0E3 1048 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 POLE3Q9NRF9 147 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 KCNE5Q9UJ90 142 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 VDAC3Q9Y277 283 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 AP4B1Q9Y6B7 739 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 TACC2O95359 2948 aa12.77□□□□□ -0.37
TOP3B-215ENST00000470338 ABCA12Q86UK0 2595 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 FBN2P35556 2912 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 FAM234BA2RU67 622 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 PRAMEF27A3QJZ7 478 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 H3BNH8 94 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 HMGN4O00479 90 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 RFXANKO14593 260 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 DVL2O14641 736 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 OIP5O43482 229 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 RCBTB2O95199 551 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 GSNP06396 782 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 SNRPB2P08579 225 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms