RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 BAMBIQ13145 260 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 HTR4Q13639 388 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 SERTAD2Q14140 314 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 SLBPQ14493 270 aaKnown RBP eCLIP7.43□□□□□ -1.22
TPM3-215ENST00000469717 MINDY4Q4G0A6 757 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 GRHL2Q6ISB3 625 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 FUT10Q6P4F1 479 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 OVCH2Q7RTZ1 564 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 KRT78Q8N1N4 520 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 ZNF454Q8N9F8 522 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 MORN4Q8NDC4 146 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 BVESQ8NE79 360 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 ZG16BQ96DA0 208 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 ECHDC3Q96DC8 303 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 WSB2Q9NYS7 404 aaPredicted RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 COPZ2Q9P299 210 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 A0A0G2JK05 382 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 A0A1W2PRQ8 180 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 TRABD2BA6NFA1 517 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 H0YIV9 168 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 SMAD9O15198 467 aaKnown RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 STATHP02808 62 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 MMP12P39900 470 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 BUD31P41223 144 aaPredicted RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 KCNJ5P48544 419 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 FNTBP49356 437 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 AKR1C2P52895 323 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 C21orf58P58505 322 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 AKR1C1Q04828 323 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 FAM26DQ5JW98 314 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 PIP5KL1Q5T9C9 394 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 C18orf63Q68DL7 685 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 SLC27A4Q6P1M0 643 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 ZNF613Q6PF04 617 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 ZNF322Q6U7Q0 402 aaPredicted RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 BTN2A1Q7KYR7 527 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 SERINC5Q86VE9 423 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 CPXM2Q8N436 756 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 OR1S1Q8NH92 325 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 MRPS24Q96EL2 167 aaKnown RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 TIMP4Q99727 224 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 HCAR1Q9BXC0 346 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 SEMA4CQ9C0C4 833 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 TEX10Q9NXF1 929 aaPredicted RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 ZNF69Q9UC07 566 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 KIF25Q9UIL4 384 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 MSRAQ9UJ68 235 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 MRTO4Q9UKD2 239 aaKnown RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 PRELID3BQ9Y3B1 194 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 STON1Q9Y6Q2 735 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 CACNA1GO43497 2377 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 A0A0U1RQF3 1178 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 A0A1B0GVI7 797 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 PLSCR5A0PG75 271 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 PRKRAO75569 313 aaKnown RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 UBXN7O94888 489 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 NPR2P20594 1047 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 ADH7P40394 386 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 PRKAG1P54619 331 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 PRMT2P55345 433 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 ERVK-25P63136 954 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 HLXQ14774 488 aaPredicted RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 FCRLBQ6BAA4 426 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 FAM71E1Q6IPT2 247 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 OR8K3Q8NH51 312 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 TEX47Q8TBZ9 253 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 CLP1Q92989 425 aaKnown RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 EXOSC8Q96B26 276 aaKnown RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 ZNF354BQ96LW1 612 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 MOGAT1Q96PD6 335 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 SLC22A12Q96S37 553 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 UBL7Q96S82 380 aaPredicted RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 ARL6Q9H0F7 186 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 HINT3Q9NQE9 182 aaKnown RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 CXXC1Q9P0U4 656 aaPredicted RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 TRPC4Q9UBN4 977 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 KLK11Q9UBX7 282 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 LSM7Q9UK45 103 aaKnown RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 ING1Q9UK53 422 aaPredicted RBP7.43□□□□□ -1.22
TPM3-215ENST00000469717 ACSL5Q9ULC5 683 aa7.43□□□□□ -1.22
TPM3-215ENST00000469717 CPSF4LA6NMK7 179 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 SUSD5O60279 629 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 FGF18O76093 207 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 OAZ2O95190 189 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 ATF1P18846 271 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 RBMS1P29558 406 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 CTSOP43234 321 aaPredicted RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 RFX3P48380 749 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 CTSCP53634 463 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 ELAVL2Q12926 359 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 HSD17B12Q53GQ0 312 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 CEACAM19Q7Z692 300 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 MRPL10Q7Z7H8 261 aaKnown RBP7.42□□□□□ -1.22
TPM3-215ENST00000469717 CPOQ8IVL8 374 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 KLHL36Q8N4N3 616 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 CLRN3Q8NCR9 226 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 LRRC46Q96FV0 321 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 OR51I1Q9H343 314 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 PRDM9Q9NQV7 894 aa7.42□□□□□ -1.22
TPM3-215ENST00000469717 SLC39A1Q9NY26 324 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms