RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 KCNJ10P78508 379 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 ARG2P78540 354 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 OC90Q02509 493 aaPredicted RBP10.19□□□□□ -0.78
VCP-204ENST00000466100 KCNAB2Q13303 367 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 DUSP7Q16829 419 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 GLIPR1L2Q4G1C9 344 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 LIN52Q52LA3 116 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 MTX3Q5HYI7 312 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 MRPL2Q5T653 305 aaKnown RBP10.19□□□□□ -0.78
VCP-204ENST00000466100 PRAMEF20Q5VT98 475 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 SLC22A10Q63ZE4 541 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 CYP2R1Q6VVX0 501 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 EIF3MQ7L2H7 374 aaKnown RBP10.19□□□□□ -0.78
VCP-204ENST00000466100 MARCH3Q86UD3 253 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 DHFR2Q86XF0 187 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 SPPL2CQ8IUH8 684 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 GRAMD2AQ8IUY3 354 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 CMIPQ8IY22 773 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 EID3Q8N140 333 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 CLIP4Q8N3C7 705 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 FAM86B1Q8N7N1 296 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 SMYD1Q8NB12 490 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 ZNF527Q8NB42 609 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 FAM162AQ96A26 154 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 ABHD17AQ96GS6 310 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 NSMCE2Q96MF7 247 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 RNF145Q96MT1 663 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 SPATA5L1Q9BVQ7 753 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 OSBPL11Q9BXB4 747 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 PINK1Q9BXM7 581 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 HES7Q9BYE0 225 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 METTL7AQ9H8H3 244 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 GALNT9Q9HCQ5 603 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 TIMMDC1Q9NPL8 285 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 SEC14L3Q9UDX4 400 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 IFT52Q9Y366 437 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 PCDHGB6Q9Y5F9 930 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 WIF1Q9Y5W5 379 aa10.19□□□□□ -0.78
VCP-204ENST00000466100 ZNF407Q9C0G0 2248 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 MED12Q93074 2177 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 TCRBV3S1A0A5B6 114 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 SYT5O00445 386 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 SCDO00767 359 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 SCO2O43819 266 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 ADAM11O75078 769 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 TRIM3O75382 744 aaPredicted RBP10.18□□□□□ -0.78
VCP-204ENST00000466100 ANGPTL1O95841 491 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 SEMG1P04279 462 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 SP1P08047 785 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 FAM87AP0C7U9 286 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 IL7RP16871 459 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 SKP2Q13309 424 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 FLOT2Q14254 428 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 LARS2Q15031 903 aaKnown RBP10.18□□□□□ -0.78
VCP-204ENST00000466100 COL28A1Q2UY09 1125 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 NDUFAF6Q330K2 333 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 ZNF311Q5JNZ3 666 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 TBCELQ5QJ74 424 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 SLC30A6Q6NXT4 461 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 C19orf48Q6RUI8 117 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 VTCN1Q7Z7D3 282 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 RBMXL3Q8N7X1 1067 aaKnown RBP10.18□□□□□ -0.78
VCP-204ENST00000466100 GATSQ8NAP1 163 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 CATSPER1Q8NEC5 780 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 BHLHE22Q8NFJ8 381 aaPredicted RBP10.18□□□□□ -0.78
VCP-204ENST00000466100 CNOT9Q92600 299 aaKnown RBP10.18□□□□□ -0.78
VCP-204ENST00000466100 RAB3IPQ96QF0 476 aaPredicted RBP10.18□□□□□ -0.78
VCP-204ENST00000466100 ARHGDIGQ99819 225 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 KLHDC3Q9BQ90 382 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 WFDC6Q9BQY6 131 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 TBL1XR1Q9BZK7 514 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 ADNPQ9H2P0 1102 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.18□□□□□ -0.78
VCP-204ENST00000466100 SACM1LQ9NTJ5 587 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 RLIMQ9NVW2 624 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 DNAJB12Q9NXW2 375 aaKnown RBP10.18□□□□□ -0.78
VCP-204ENST00000466100 KLRF1Q9NZS2 232 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 TP53TG5Q9Y2B4 290 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 SLC35A3Q9Y2D2 325 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 DNAJC13O75165 2243 aa10.18□□□□□ -0.78
VCP-204ENST00000466100 PINLYPA6NC86 204 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 LRRC3CA6NJW4 275 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 AQP12BA6NM10 295 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 G3V3Y1 287 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 SNPHO15079 494 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 NDUFB5O43674 189 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 LGI1O95970 557 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 IFNA14P01570 189 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 P04436 131 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 FESP07332 822 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 C8BP07358 591 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 UBL4AP11441 157 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 HPGDP15428 266 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 DNASE1L1P49184 302 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 SELENOWP63302 87 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 RHDQ02161 417 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 ZNF117Q03924 483 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 FOXO1Q12778 655 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 CCNIQ14094 377 aa10.17□□□□□ -0.78
VCP-204ENST00000466100 INPP5JQ15735 1006 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms