RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 NPIPA8P0DM63 369 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 HPGDP15428 266 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 PPIBP23284 216 aaKnown RBP15.47■□□□□ 0.07
VPS52-215ENST00000464425 DPP4P27487 766 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 COL8A1P27658 744 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 SRD5A2P31213 254 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 RNF144AP50876 292 aaPredicted RBP15.47■□□□□ 0.07
VPS52-215ENST00000464425 ANXA11P50995 505 aaKnown RBP15.47■□□□□ 0.07
VPS52-215ENST00000464425 CRYZQ08257 329 aaKnown RBP15.47■□□□□ 0.07
VPS52-215ENST00000464425 C17orf67Q0P5P2 114 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 PMPCAQ10713 525 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 DCST1Q5T197 706 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 REP15Q6BDI9 236 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 VASNQ6EMK4 673 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 RTL6Q6ICC9 239 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 TNFAIP8L2Q6P589 184 aaPredicted RBP15.47■□□□□ 0.07
VPS52-215ENST00000464425 DNAJC14Q6Y2X3 702 aaPredicted RBP15.47■□□□□ 0.07
VPS52-215ENST00000464425 MAMDC2Q7Z304 686 aaPredicted RBP15.47■□□□□ 0.07
VPS52-215ENST00000464425 DHDDSQ86SQ9 333 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 MSRB3Q8IXL7 192 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 ZNF808Q8N4W9 903 aaPredicted RBP15.47■□□□□ 0.07
VPS52-215ENST00000464425 PHF10Q8WUB8 498 aaKnown RBP15.47■□□□□ 0.07
VPS52-215ENST00000464425 RAB8BQ92930 207 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 UGT2B28Q9BY64 529 aa15.47■□□□□ 0.07
VPS52-215ENST00000464425 ALG1L2C9J202 215 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 SCDO00767 359 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 MRASO14807 208 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 NGFRP08138 427 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 OR12D1P0DN82 309 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 GP1BBP13224 206 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 GCKP35557 465 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 MVDP53602 400 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 DSCR4P56555 118 aaPredicted RBP15.46■□□□□ 0.07
VPS52-215ENST00000464425 NUP107P57740 925 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 NFYCQ13952 458 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 KRT72Q14CN4 511 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 CDSNQ15517 529 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 TRMT5Q32P41 509 aaKnown RBP15.46■□□□□ 0.07
VPS52-215ENST00000464425 GTDC1Q4AE62 458 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 RUNDC3AQ59EK9 446 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 C1orf185Q5T7R7 199 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 TMEM211Q6ICI0 200 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 OLIG3Q7RTU3 272 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 IFNEQ86WN2 208 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 RNF130Q86XS8 419 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 POU5F2Q8N7G0 328 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 XAGE5Q8WWM1 108 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 ROPN1LQ96C74 230 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 SDF2Q99470 211 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 CGREF1Q99674 301 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 RAD21L1Q9H4I0 556 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 EFCAB1Q9HAE3 211 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 GID8Q9NWU2 228 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 THUMPD1Q9NXG2 353 aaKnown RBP15.46■□□□□ 0.07
VPS52-215ENST00000464425 CORO2BQ9UQ03 480 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 CAMK2AQ9UQM7 478 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 FAM215AQ9Y5M1 114 aa15.46■□□□□ 0.07
VPS52-215ENST00000464425 WDR1O75083 606 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 GPX2P18283 190 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 HK1P19367 917 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 LCN1P31025 176 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 DCTP40126 519 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 STARP49675 285 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 KHKP50053 298 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 FADDQ13158 208 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 FLYWCH1Q4VC44 716 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 NHSL2Q5HYW2 709 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 AP1ARQ63HQ0 302 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 XKRXQ6PP77 449 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 B3GNT6Q6ZMB0 384 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 C16orf62Q7Z3J2 963 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 ULK2Q8IYT8 1036 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 OR5M1Q8NGP8 315 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 OR10Q1Q8NGQ4 319 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 PNPT1Q8TCS8 783 aaKnown RBP15.45■□□□□ 0.06
VPS52-215ENST00000464425 RND1Q92730 232 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 SDCCAG3Q96C92 435 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 LRRC58Q96CX6 371 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 DTNBP1Q96EV8 351 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 AURKBQ96GD4 344 aaPredicted RBP15.45■□□□□ 0.06
VPS52-215ENST00000464425 WDYHV1Q96HA8 205 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 SFXN2Q96NB2 322 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 ANKRD27Q96NW4 1050 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 TTYH2Q9BSA4 534 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 HOXD1Q9GZZ0 328 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 PTGES2Q9H7Z7 377 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 EXD2Q9NVH0 621 aa15.45■□□□□ 0.06
VPS52-215ENST00000464425 MRPS18CQ9Y3D5 142 aaKnown RBP15.45■□□□□ 0.06
VPS52-215ENST00000464425 SETXQ7Z333 2677 aaKnown RBP15.44■□□□□ 0.06
VPS52-215ENST00000464425 EVPLLA8MZ36 301 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 HMGN4O00479 90 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 FCMRO60667 390 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 ACTL6AO96019 429 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 AK1P00568 194 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 GUSBP08236 651 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 GLI4P10075 376 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 GABRA1P14867 456 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 SRYQ05066 204 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 RGNQ15493 299 aa15.44■□□□□ 0.06
VPS52-215ENST00000464425 GPR68Q15743 365 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms