RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 SLC22A9Q8IVM8 553 aa18.47■□□□□ 0.55
CPSF7-209ENST00000463244 FAM76AQ8TAV0 307 aa18.47■□□□□ 0.55
CPSF7-209ENST00000463244 OSTF1Q92882 214 aa18.47■□□□□ 0.55
CPSF7-209ENST00000463244 NEUROG1Q92886 237 aa18.47■□□□□ 0.55
CPSF7-209ENST00000463244 TSPYL1Q9H0U9 437 aa18.47■□□□□ 0.55
CPSF7-209ENST00000463244 FBXO34Q9NWN3 711 aa18.47■□□□□ 0.55
CPSF7-209ENST00000463244 LIPT1Q9Y234 373 aa18.47■□□□□ 0.55
CPSF7-209ENST00000463244 SNX8Q9Y5X2 465 aa18.47■□□□□ 0.55
CPSF7-209ENST00000463244 IGHV4-39P01824 125 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 PABPC4LP0CB38 370 aaKnown RBP18.46■□□□□ 0.55
CPSF7-209ENST00000463244 PRPS2P11908 318 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 ZNF41P51814 821 aaPredicted RBP18.46■□□□□ 0.55
CPSF7-209ENST00000463244 TSC22D1Q15714 1073 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 ZNF672Q499Z4 452 aaPredicted RBP18.46■□□□□ 0.55
CPSF7-209ENST00000463244 VPS26BQ4G0F5 336 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 SFRP5Q5T4F7 317 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 TFAP2EQ6VUC0 442 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 DNAJC14Q6Y2X3 702 aaPredicted RBP18.46■□□□□ 0.55
CPSF7-209ENST00000463244 TIFABQ6ZNK6 161 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 IKBIPQ70UQ0 350 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 ZNF551Q7Z340 670 aaPredicted RBP18.46■□□□□ 0.55
CPSF7-209ENST00000463244 TRABD2AQ86V40 505 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 LCA5Q86VQ0 697 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 MMGT1Q8N4V1 131 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 GATSQ8NAP1 163 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 POC1BQ8TC44 478 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 RNF128Q8TEB7 428 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 ROBO4Q8WZ75 1007 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 KLHL15Q96M94 604 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 LRTM1Q9HBL6 345 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 NGBQ9NPG2 151 aa18.46■□□□□ 0.55
CPSF7-209ENST00000463244 ADH6P28332 368 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 CARD18P57730 90 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 ETF1P62495 437 aaKnown RBP18.45■□□□□ 0.54
CPSF7-209ENST00000463244 HSPB3Q12988 150 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 ZNF239Q16600 458 aaKnown RBP18.45■□□□□ 0.54
CPSF7-209ENST00000463244 IMPG1Q17R60 797 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 PGGHGQ32M88 737 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 TMEM201Q5SNT2 666 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 SYT10Q6XYQ8 523 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 NUFIP2Q7Z417 695 aaKnown RBP18.45■□□□□ 0.54
CPSF7-209ENST00000463244 ZAR1Q86SH2 424 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 LILRA2Q8N149 483 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 CEP112Q8N8E3 955 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 CDRT4Q8N9R6 151 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 ABHD3Q8WU67 409 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 HSD17B8Q92506 261 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 SH3YL1Q96HL8 342 aaPredicted RBP18.45■□□□□ 0.54
CPSF7-209ENST00000463244 KLHDC3Q9BQ90 382 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 GSTO2Q9H4Y5 243 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 MID1IP1Q9NPA3 183 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 YAE1D1Q9NRH1 226 aa18.45■□□□□ 0.54
CPSF7-209ENST00000463244 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.44■□□□□ 0.541e-7■■■□□ 17.7
CPSF7-209ENST00000463244 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 A0A087WUV0 522 aaPredicted RBP18.44■□□□□ 0.54
CPSF7-209ENST00000463244 A0A1W2PP18 115 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 UBFD1O14562 309 aaKnown RBP18.44■□□□□ 0.54
CPSF7-209ENST00000463244 ADAM11O75078 769 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 IL32P24001 234 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 RNPS1Q15287 305 aaKnown RBP18.44■□□□□ 0.54
CPSF7-209ENST00000463244 NOXRED1Q6NXP6 359 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 SEZ6L2Q6UXD5 910 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 TRIM46Q7Z4K8 759 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 ATG4DQ86TL0 474 aaPredicted RBP18.44■□□□□ 0.54
CPSF7-209ENST00000463244 MISPQ8IVT2 679 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 TUSC5Q8IXB3 177 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 ZNF619Q8N2I2 560 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 KBTBD8Q8NFY9 601 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 CEP70Q8NHQ1 597 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 FAM110BQ8TC76 370 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 GIMAP5Q96F15 307 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 ZBED6CLQ96FA7 236 aaPredicted RBP18.44■□□□□ 0.54
CPSF7-209ENST00000463244 EGLN2Q96KS0 407 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 FMO2Q99518 471 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 KLHL13Q9P2N7 655 aa18.44■□□□□ 0.54
CPSF7-209ENST00000463244 EXOC1LA0A1B0GW35 172 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 NDUFS7O75251 213 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 RSL1D1O76021 490 aaKnown RBP18.43■□□□□ 0.54
CPSF7-209ENST00000463244 KCNK2O95069 426 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 NTN1O95631 604 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 LINGO3P0C6S8 592 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 ACP2P11117 423 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 GCAP28676 217 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 SHC1P29353 583 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 SFTPDP35247 375 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 CKAP4Q07065 602 aaKnown RBP18.43■□□□□ 0.54
CPSF7-209ENST00000463244 BSPH1Q075Z2 132 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 FAPQ12884 760 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 BANPQ8N9N5 519 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 OR6Y1Q8NGX8 325 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 PIWIL2Q8TC59 973 aaKnown RBP18.43■□□□□ 0.54
CPSF7-209ENST00000463244 TMEM158Q8WZ71 300 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 KISS1RQ969F8 398 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-209ENST00000463244 CPNE4Q96A23 557 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-209ENST00000463244 REXO5Q96IC2 774 aaKnown RBP18.43■□□□□ 0.54
CPSF7-209ENST00000463244 TRAF4Q9BUZ4 470 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-209ENST00000463244 SRXN1Q9BYN0 137 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 TRIM2Q9C040 744 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 UBQLN4Q9NRR5 601 aa18.43■□□□□ 0.54
CPSF7-209ENST00000463244 NTMQ9P121 344 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms